Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00085 ATGGGCAATTGTTGCTCCCAAGGCAACGCCGCAGATGCCCCGGAGGCCGACAATGCGGCCACCGCAACCAAGGGAGACTCAAACCAACAACAAACCACAGACAATGATAACAAAAATAATAATAATAATAACAATGAAAGCCCATCCACAAGCCCTCCGGCGGCCAGCAAGCCTCCACCACCCTCAACAACATCTCCTCCGTCAACAACAAAACCTACAAAGCCCGGGCCTATAGGGCCCGTGCTGGGGAGGCCAATGGAGGACATAAAAGCGTCATATAGTCTGGGTAAGGAGCTAGGTAGAGGCATGTTTGGGGTAACATATTTATGCACACACAAGGCAACAGGAAAACAATTTGCATGCAAAACAATTGCGAAGAGGAAGCTAGTGAATAAGGAGGATATAGAGGACGTTAGAAGGGAGGTGCAGATCCTGTACCACCTGTCAGGGCAGCCTAACATCGTAGAGCTTAAAGGTGCCTATGAGGACAAACAATCTGTTCATTTAGTGATGGAATTGTGTGCGGGTGGTGAACTCTTTGATCGCATCATTGCCAAGGGCCACTATACCGAGCGTGCCGCTGCTACCTTGTTAAGAACCATTATGGAGATTGTCCACACTTTTCACTCTCTTGGTGTCATTCATAGAGATCTCAAGCCTGAGAATTTCCTCTTGTTGAGCAAGGACGAAGATGCTCCCCTTAAAGCCACCGATTTTGGTTTATCCGTTTTTTACAAGCAAGGAGATGTTTTCAAGGACATTGTTGGTAGTGCATACTACATTGCACCTGAAGTATTGAAAAGGAAATATGGTCCAGAGGTTGATATATGGAGTGTTGGTGTTATGCTTTACATTCTTTTATGTGGAGTTCCTCCATTTTGGGCAGAATCTGAACATGGCATATTCAATGCCATCCTAAGAGGTCACGTTGACTTTTCAAGCGATCCATGGCCTTCAATTTCACCATCTGCAAAAGATCTTGTACGAAAAATGTTGAATTCAGATCCTAAACAAAGGCTTACAGCTTATGAAGTTTTGAATCATCCTTGGGTTAAGGAAGATGGAGAAGCACCAGATAAGCCTATTGATAATGCTGTGCTAAGTAGGCTCAAACAATTCAAAGCAATGAATGAATTCAAGAAAGTTGCTTTAAGGGTTATTGCAGGATGCTTATCAGAAGAAGAAATTATGGGGTTAAAGGAAATGTTTAAGGGAATGGACACTGATAATAGTGGAACCATTACAATTGAAGAACTTAAGCAGGGTCTTGCAAAGCAAGGGACAAAGCTATCAGAACAAGAAGTTCAACAATTACTGGAAGCAGCAGATGCTGACGGAAATGGTACCATAGACTATGATGAATTCATCACAGCAACAGTGCACATGAACAGAATGAACAGAGAAGAACATCTTTATAAAGCCTTCCAATACTTTGATAAAGATAATAGCGGGTTTATCACCACTGAAGAATTAGAGCAAGCTCTCCATGAATATAACATCCACGATGGAAGAGACATCAATGAAATCGTTCAAGAAGTTGATGTAGATAACGATGGTCGTATTAACTATGAAGAGTTTGTGGCAATGATGAGAAAAGGACAAGCTGAAGCTCATACAAAAAAGAGACGTGAATCACTTCATTTGCATCCATAG 1653 0.4241 MGNCCSQGNAADAPEADNAATATKGDSNQQQTTDNDNKNNNNNNNESPSTSPPAASKPPPPSTTSPPSTTKPTKPGPIGPVLGRPMEDIKASYSLGKELGRGMFGVTYLCTHKATGKQFACKTIAKRKLVNKEDIEDVRREVQILYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAATLLRTIMEIVHTFHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFYKQGDVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSSDPWPSISPSAKDLVRKMLNSDPKQRLTAYEVLNHPWVKEDGEAPDKPIDNAVLSRLKQFKAMNEFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVQQLLEAADADGNGTIDYDEFITATVHMNRMNREEHLYKAFQYFDKDNSGFITTEELEQALHEYNIHDGRDINEIVQEVDVDNDGRINYEEFVAMMRKGQAEAHTKKRRESLHLHP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00085 550 MobiDBLite consensus disorder prediction 1 85 - -
Aip04g00085 550 ProSitePatterns Protein kinases ATP-binding region signature. 99 126 IPR017441 GO:0005524
Aip04g00085 550 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Aip04g00085 550 MobiDBLite consensus disorder prediction 52 74 - -
Aip04g00085 550 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Aip04g00085 550 SMART efh_1 505 533 IPR002048 GO:0005509
Aip04g00085 550 SMART efh_1 434 462 IPR002048 GO:0005509
Aip04g00085 550 SMART efh_1 398 426 IPR002048 GO:0005509
Aip04g00085 550 SMART efh_1 470 498 IPR002048 GO:0005509
Aip04g00085 550 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Aip04g00085 550 Gene3D - 359 539 - -
Aip04g00085 550 ProSiteProfiles Protein kinase domain profile. 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00085 550 ProSiteProfiles EF-hand calcium-binding domain profile. 505 536 IPR002048 GO:0005509
Aip04g00085 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 539 - -
Aip04g00085 550 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Aip04g00085 550 Gene3D Transferase(Phosphotransferase) domain 1 179 358 - -
Aip04g00085 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Aip04g00085 550 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Aip04g00085 550 SUPERFAMILY Protein kinase-like (PK-like) 92 356 IPR011009 -
Aip04g00085 550 Pfam Protein kinase domain 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00085 550 Gene3D Phosphorylase Kinase; domain 1 95 178 - -
Aip04g00085 550 SUPERFAMILY EF-hand 391 532 IPR011992 -
Aip04g00085 550 Pfam EF-hand domain pair 399 459 IPR002048 GO:0005509
Aip04g00085 550 Pfam EF-hand domain pair 468 531 IPR002048 GO:0005509
Aip04g00085 550 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 35 539 - -
Aip04g00085 550 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Aip04g00085 550 MobiDBLite consensus disorder prediction 21 51 - -
Aip04g00085 550 SMART serkin_6 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00085 550 CDD STKc_CAMK 93 350 - -
Aip04g00085 550 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00085 Aip-Chr4 802972 808131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00085 1 544 EF-hand Containing Proteins AT5G12180 79.044 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip04g00085 Pkinase 2.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00085 K13412 - gmx:100781355 891.338