Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00080 ATGGCATTATGCTTGAAGCCACCAAGGCTACACCACAGCAACAATAACGAAGATGACTCTGCAGTCTTCTTGGCGCCACCACCACTAATAAATCAATTCAAAACTGCTTACAAACTTCACGTCAGAAACCTCTCCTATACTCTGCACCAAAACAACACCACTTCCTTCTCATTATGTCAAAAGCCTAAGCCTGTGACAATACTCAAGTCTGTGACTTTTGTTGCAAGGTGTTCAGAGATAGTTGCGGTGGTGGGTCCCAGCGGCACAGGAAAGTCCACTCTTCTCCGGATAATCTCCGGGCGGGTGAAAGAAAAAGATTTCGATCCCAAGAGCATATCGATCAATGAGCAGCCAATGACCATGCCAGCACAATTGAGGAAGCTTTGTGGATTTGTGCCACAAGAGGACAACCTGCTTCCTCTTCTAAGCGTCAAAGAAACTCTTCTCTTCAGCGCCAAGTTCAGACTGAAGGAAATGACACCAAAACAACGAGAATTGCGTGTCGAAAGCTTGATGCAAGACCTAGGCCTTTCCCACGTGGCAGATAGTTTCGTTGGAAATGAAGACAACAGAGGTATATCAGGTGGCGAGAGGAAAAGAGTTTCAATTGGGGTTGACATGATTCACGACCCTCCAATCTTGCTCTTAGATGAACCAACATCAGGCCTAGACAGTACTTCGGCATTGCAAGTCATAGAGCTTCTTTCTTCGTTGGTCAAAGCTAAGAAGAGGACAGTGGTTCTGTCAATCCACCAACCCGGTTACAGAATATTGCGCTACATTTCTAGGTTCTTGATCCTCTCCAATGGCTCAGTGGTTCACAACGGTAGCCTAGATTCCCTTGAGGAAGCCATTACCAAATTGGGGTTTCAGATTCCCATGCAACTCAATGCTTTGGAATTCTCCATGGAAATCATACGCACCTTACAAGATTATTCCGCTTCCAAAACCAAAACCACTGAGCTGGAAGAAAACGAGGCATTATTTCCAAACCCCATGTACCCAGTGGAAGGAAACAGAGCTATGATGACATTTTGTTATGCAAACTTGGTTGAGATATGGTTCCTTTGCTCAAGATTCTGGAAGATTATTTACAGGACAAAGCAATTATTCTTGGCAAGAACAATGCAAGCATTGGTTGGTGGATTTGGGTTAGGAAGTGTTTACATAAAAATAAGGAAGGATGAAGGAGGAGTAGCAGAAAGGTTAGGGTTATTTGCATTTAGCCTTAGTTTTTTGCTGTCTTCAACGGTTGAAGCGCTTCCAATATACCTTCAAGAAAGGCGTGTTGTGATGAAAGAAGCGTCAAGGGGAGCCTATAGAATCTCCAATTACATGATAGCCAACACTTTTGTGTTCCTTCCTTTCTTGTTTCTAGTTTCGATATTATTTGCAGTTCCGGTTTATTGGCTCGTAGGACTCAACCCTTCAATCAGCGCCTTCGGATTCTTCGCTTTAGTCGTGTGGTTCATCGTCCTCATGGCCAGTTCTCTGGTGCTCTTCTTGAGCGCGGTGTCACCTGATTTCATTTCCGGCAACTCTCTCATTTGCACAGTCCTCGGAGCCTTCTTCCTCTTCTCTGGATACTTCATTCCCAAGGACAGCATCCCAAAGTATTGGCTTTTTATGTATTATGTGTCACTCTATAGGTACCCTTTGGATGCACTCATCACAAATGAGTACTGGAATAAGAGAAATAAGTGCTTCTCATTCTCATCATCATCATCATCTTCTTCTTATTCCAAGTGCTTGACTACTGGCTTTGATGTGTTGAAGAGTAGAGGGCTTGAAAAGGATGAGAGGTGGATCAACGTGGGAATAATGTTTGGATTCTTTCTCTTTTATCGTCTGCTTTGTTGGCTTATACTTGCACGAAAGGCCTCCAAGTCAATTATATGA 1899 0.4365 MALCLKPPRLHHSNNNEDDSAVFLAPPPLINQFKTAYKLHVRNLSYTLHQNNTTSFSLCQKPKPVTILKSVTFVARCSEIVAVVGPSGTGKSTLLRIISGRVKEKDFDPKSISINEQPMTMPAQLRKLCGFVPQEDNLLPLLSVKETLLFSAKFRLKEMTPKQRELRVESLMQDLGLSHVADSFVGNEDNRGISGGERKRVSIGVDMIHDPPILLLDEPTSGLDSTSALQVIELLSSLVKAKKRTVVLSIHQPGYRILRYISRFLILSNGSVVHNGSLDSLEEAITKLGFQIPMQLNALEFSMEIIRTLQDYSASKTKTTELEENEALFPNPMYPVEGNRAMMTFCYANLVEIWFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKIRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERRVVMKEASRGAYRISNYMIANTFVFLPFLFLVSILFAVPVYWLVGLNPSISAFGFFALVVWFIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKDSIPKYWLFMYYVSLYRYPLDALITNEYWNKRNKCFSFSSSSSSSSYSKCLTTGFDVLKSRGLEKDERWINVGIMFGFFLFYRLLCWLILARKASKSII 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00080 632 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Aip04g00080 632 Gene3D - 39 324 IPR027417 -
Aip04g00080 632 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 294 IPR003439 GO:0005524
Aip04g00080 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 285 IPR027417 -
Aip04g00080 632 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 625 - -
Aip04g00080 632 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 17 625 - -
Aip04g00080 632 SMART AAA_5 77 271 IPR003593 -
Aip04g00080 632 Pfam ABC-2 type transporter 352 561 IPR013525 GO:0016020|GO:0140359
Aip04g00080 632 Pfam ABC transporter 68 221 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00080 Aip-Chr4 751183 753520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00080 56 307 Calmodulin-binding Proteins AT2G36910 30.597 3.34e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00080 K05681 - gmx:100783883 941.414