Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00069 ATGAAGGACAAGGACAAGGACAAGGAAAAAGAGGCGGAGAAGAAGAAGTACCCTATCGGCGCCGAGCATTACGATCTCTACGAGGAGATTGGACACGGCGTCAGTGCCGCCGTCCACCGCGCGCTTTGCATCCCCTTAAACGAGATCGTCGCCATCAAGATCCTCGACTTCGAACGCGACAACTGCGATCTGAACAATGTTTCACGCGAAGCACAGACGATGGTGCTGGTGGACCACCCTAACGTGCTGAAATCGCACTGCTCCTTCGTGAACGAGCACAGCCTGTGGGTTGTGATGCCGTACATGGCGGGCGGATCGTGCCTCCATATCCTCAAGGCCGCGCACCCCGACGGATTCGAGGAGGTTGTGATTGCTACCATCCTTCGCGAGGTCCTCAAGGGTTTAGAGTACCTTCACCACCACGGACACATCCACAGGGACGTCAAGTCCGGCAACATTCTCATCGATTCCCGCGGCGCCATCAAGCTCGGCGACTTCGGTGTCTCCGCCTGTCTCTTTGATTCCGGTGATAGGCAGCGCACCAGGAATACTTTTGTTGGAACACCTTGTTGGATGGCACCCGAAGTAATGGAGCAGTTACATGGTTATAATTTCAAAGCTGACATTTGGTCATTTGGCATAACTGCACTGGAGCTTGCCCACGGTCATGCTCCTTTCTCAAAGTTTCCCCCAATGAAGGTACTGCTTATGACTTTGCAAAATGCACCCCCCGGCCTTGACTACGAGAGGGATCGAAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGTTGCTTAGTGAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTCAAGCAGGCTCGCTCCAATGATTATATTGCACGAACACTTTTGGAGGGGCTGCCTGCTTTAGGTGACCGCATGGAGGCCCTAAAGAGAAAAGATGAAGATATGCTTGCACAAAAGAAAATGCCCGATGGCGAGATGGAGGAATTATCACAGAACGAATACAAACGGGGAATTAGTGGCTGGAACTTCAATCTTGATGATATGAAGGCTCAGGCTTCATTGATCCATGATTTTGATGATGCTATATCAGATATCAATCATGTAGCAAGTTCAGCTTCTTTATCTTCCCTTGATGTACAAGATAAGCCGAGTGCAAGTCATAATCCCTCTCGAAGTGTTGATCTGGAAGATATTGATGAGCTACAAAATCAATCAGCTTCTGTTCCAGCAATTGATTACACAGTAAATGATGCCAAGATCAAGTTTGAAAAATCTGACGATGACTCTAGCATTACCAGTTCAAGCCATGAACAAAGCATTTCACTAGCTTCTCCGTCCTGTCTTGATGATCGTGTGGACCATAATGTGGGAGAAAAATCTGATGTGGAAAATGGTATGGCTATCCATTCTTTTCATAGAAGAGGATCTTCATCAAGCATTTTACCTGAAGTAACTCTTCCACAAATTCGACCAGAAAGTGAGAAGCCACCCAATCTGCCCCAGAGCACCTCAAGTGGCAACGCAAATTCACAGACAGGAGAGGACGTGCTTACTGAACTTCCTTCTAAAATCTCAAAATCATCAGCTAATGCTGAAGAGACTGATGAGAAAGCAAAGATACCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTACTCCTGTACTGCAAAAGAGTCACAGTATGCAGATTATTAGCCAGCATAGTGCTCCTGCTCCTCTGCCTTCACCATTACCGTTACTGTCAGCATCTGATGCTACTATATCATCAAATCTTTCTGGCTGTTCACTTTTCCCTTTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAAAGGGAGAGCATTTTAAGTTTAATGAAGCAAATCAGTGCAAATGACACCACAGCTGATGCCACGTGTATCCCAGCACAAATAGCAGCTACTGAGAAATCTTTGAGGTCATTTGCTGCAAATCCTGTACGCTTGCTGATATGCACCCAAGAGGAGCTTCAAAAATTGAAGACAGATAACGCTCAGGTATGA 2067 0.4654 MKDKDKDKEKEAEKKKYPIGAEHYDLYEEIGHGVSAAVHRALCIPLNEIVAIKILDFERDNCDLNNVSREAQTMVLVDHPNVLKSHCSFVNEHSLWVVMPYMAGGSCLHILKAAHPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKSGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDYIARTLLEGLPALGDRMEALKRKDEDMLAQKKMPDGEMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAISDINHVASSASLSSLDVQDKPSASHNPSRSVDLEDIDELQNQSASVPAIDYTVNDAKIKFEKSDDDSSITSSSHEQSISLASPSCLDDRVDHNVGEKSDVENGMAIHSFHRRGSSSSILPEVTLPQIRPESEKPPNLPQSTSSGNANSQTGEDVLTELPSKISKSSANAEETDEKAKIPVVQQRGRFKVTSENVDPEKVAPTPVLQKSHSMQIISQHSAPAPLPSPLPLLSASDATISSNLSGCSLFPLLHSVLQTNILQRESILSLMKQISANDTTADATCIPAQIAATEKSLRSFAANPVRLLICTQEELQKLKTDNAQV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00069 688 Gene3D Phosphorylase Kinase; domain 1 12 100 - -
Aip04g00069 688 Pfam Protein kinase domain 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00069 688 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 687 - -
Aip04g00069 688 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Aip04g00069 688 MobiDBLite consensus disorder prediction 428 458 - -
Aip04g00069 688 CDD STKc_OSR1_SPAK 22 285 - -
Aip04g00069 688 Gene3D Transferase(Phosphotransferase) domain 1 105 337 - -
Aip04g00069 688 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 687 - -
Aip04g00069 688 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00069 688 MobiDBLite consensus disorder prediction 494 518 - -
Aip04g00069 688 MobiDBLite consensus disorder prediction 378 395 - -
Aip04g00069 688 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00069 688 MobiDBLite consensus disorder prediction 378 398 - -
Aip04g00069 688 MobiDBLite consensus disorder prediction 499 518 - -
Aip04g00069 688 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00069 Aip-Chr4 653879 661080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00069 13 643 MAP Kinase Kinase Kinase Kinase AT1G79640 64.275 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aip04g00069 Pkinase 1.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00069 K08835 - gmx:100780339 1062.37