Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00058 ATGATCGATGACGACATGGAGGCTGGTTCTTTGGGGCCTTACCACGACAGGCCAAGAACTTTCCCCAACATGCGCACCAAACCTTACACCCCACTGATATTTCGTATTCTCCTGGGAATAAATGTCCGTGTTCTATTCATTCTTTTGCTCCTCGGATTTGGGGCTATCTTTTACATGGGAGCCAGTACATCTCCCATCATTGTGTTTGTCATCTCTATTTGTATTCTCAGCTTCCTTGTGTCTATATATCTTACAAAGTGGGTGCTTGCAAAGGATGAGGGCCCCCCTGAAATGGTTCAGATAGCAGATGCTATACGAGATGGAGCTGAAGGCTTCTTTAGGACCCAATATGGGAGTATATCCAAGATGGCAATGCTGCTTGCTCTTGTCATTCTTTGCATATATTTGTCAACTTCTGCTTACATCACTGTAGCTGCATTCCTTTTAGGTGCCCTTTGTTCAGGGATTGCTGGATATGTTGGGATGTGGGTGTCTGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCCGCAAGAGAGGCATTGCAGGTCATTAGTTTATTATCAGTTCCTGCAAAAACTATGACTGGTTCATTATTCCTATATAACACTAAGAAAGTTGTTCAGGTAGCTACTCGTGCTGGCGGTTTATCTGCTATCATCGTTGTTGGTATGGCTGTAATTGGGATAGCAGTTCTTTATGCCACATTTTATGTTTGGCTTGGCGTGGACTCACCAGGGTCGATGAAAGTTACTGATCTGCCTCTTCTTCTGGTTGGATATGGATTTGGTGCTTCCTTCGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATATACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGATAATGTAGGAGACTGTGCTGCTAGGGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCTATGATACTTGGAGGAACAATGGCTCAACGTTGTAAAATTGAAGGCAAGTACCCACTACATAATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCGTCAGTTGGAATATTTTCAATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCAATTGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTGTGGCGTTTGCTCTGTCTACACGGTGGTTGCTTTATACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGCTCGTTGGTATTATTACTGCTTATGTTTTTGTCTGGATCACTAAGTATTATACTGACTACAAGCATGAACCTGTGCGCACATTAGCCCTTTCTAGCTCCACTGGTCATGGGACTAATATAATTGCTGGAGTCACAATTATCTCAGCTTACTGGCTGGGCCAAACCTGTGGACTAGTAGATGAGACAGGAAACCCAATTGGTGGGCTGTTTGGCACAGCTGTAGCAACTATGGGAATGCTTAGCACTGCAGCTTATATTCTGACGATGGATATGTTTGGCCCAATAGCTGATAACGCTGGAGGCATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTCGACGCTGTAGGAAACACAACAAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTGCCGCATTTGCTCATCAACCTTTTAAACAGGTTGATATTGCAGTTCCAGAAGTTTTCGTTGGTGGGTTGTTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCATGTTCTGCTGTTGGCCGAACTGCGCAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGACTACAAGGAGAAACCAGACTATGGTCGCTGTGTTGCTATTGTAGCTTCGGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTTGGTTTCCTGTTTCGAATTTTGGGTTACTACACAGGGCATCCCTTACTTGGGGCTAAAGTTGTGGCATCTTTGCTGATGTTTGCAACTGTAGCTGGCATTCTTATGGCACTTTTCCTGAACACAGCCGGTGGTGCCTGGGATAATGCAAAGAAGTATATAGAGACTGGCGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCTGTAACAGGAGACACAGTTGGAGACCCTTTCAAGGACACAGCTGGTCCCTCGCTTCATGTTCTCATAAAGATGCTGGCAACGATTACGCTTGTAATGGCTCCGGTGTTCCTGTGA 2409 0.4438 MIDDDMEAGSLGPYHDRPRTFPNMRTKPYTPLIFRILLGINVRVLFILLLLGFGAIFYMGASTSPIIVFVISICILSFLVSIYLTKWVLAKDEGPPEMVQIADAIRDGAEGFFRTQYGSISKMAMLLALVILCIYLSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVISLLSVPAKTMTGSLFLYNTKKVVQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEGKYPLHNPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPIEDPMTILQKGYSVTIVLAVVAFALSTRWLLYTEQAPSAWFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVTIISAYWLGQTCGLVDETGNPIGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHQPFKQVDIAVPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGYYTGHPLLGAKVVASLLMFATVAGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00058 802 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 64 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aip04g00058 802 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 19 187 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aip04g00058 802 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 194 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aip04g00058 802 PANTHER INORGANIC DIPHOSPHATASE-RELATED 19 187 - -
Aip04g00058 802 PANTHER INORGANIC DIPHOSPHATASE-RELATED 194 802 - -
Aip04g00058 802 PIRSF H+-PPtase 59 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aip04g00058 802 Pfam Inorganic H+ pyrophosphatase 75 186 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aip04g00058 802 Pfam Inorganic H+ pyrophosphatase 204 797 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00058 Aip-Chr4 577021 583203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00058 1 802 Primary Pumps ATPases AT1G16780 79.952 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00058 K23025 - gmx:100787805 1333.93