Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00057 ATGTGGCTTCCAAGTACAAAGGCATCAGTAATTAGAAAGGGGGGAGGGGGGAATGGATTGGTGGCAGTTGCAATAGATAAGGATAGCAAAGGCAGTCGATATGCTCTCAAATGGGCTGCCGATAGCCTTCTAGCCAGAGGCCAAACTGTTGTCCTTATCCACGTTTTGCACAAGACTTCTTCCCCTCTTTCTATTGGAGGCAGCCATGCCATAATATGCAACAGCAATATTCCATCTTCATCTCCTCAAAGAGACCATGTCATCAATATTACTAAGGATCTTTTCCGTACCTTCCACTGCTATTGCACACGTAAAGATATACAATGCCTTGATGTGCTAGTTGAAGACACTGACGTTGTGAAAGGAATAACAGAATATGTGTCTTACGCGGCAATTGAGAACCTAGTGCTTGGTGCAGCGTCAAGGCATGGTTTTAttagATTCAAGTCATCAAGTACACCAAGCAACATATCAAAAGGGGCGCCCGATTTCTGTACGGTGTATATAATATCAAAAGGGAAGATATCTTCAGTGAGGAGTGCTTCTCGTTCAGCAGCGCATGCGTCTCCCCTCCTTAGCCATATACAGGCCCTAAATAATGACGATAGTGCAAGTGAAACAAGTAGTCAGTTATCGTCAAGGCGTATGAGCTTCAAAGATCATAGAAGATCCATGAAACCTCACAGCTGGCAGGACGAAGCCACAAGGTCATCACAAGTTGGAAAAACAATGGGAACCGGGGCGGGGGGGTTGAGTGTAAGGTCGTCATGCATGGAGCTGTTAGGCCCAGACTCCGATACCGACATATCATTTGTGAGCTCCGGGAGGCCAAGTAGCAGTGGCCGTTCCTCCTCTGTCTTGTATGACTGCATGGACTCTTCCTCTGCTCGTAATTCACGAGTCTCCACCAGCTCCGATCGTAGCTTGGGATCACTGCGCTGTAGCCTCGCTCTCCCCACTTCCCCCGGCCCCGATATTTCTCTTTCCTTCTCTCAGGAAAGCATTGGAACCTCCTCTTTTTCTCATTCCTCTCAGAACATGGATGATGTCGAATCTGACATGAAGAGGCTCAAGCTTGAATTAAAACAAACCATGGAAATGTATAGTACAGCGTGCCGAGAAGCACTCACTGCGCAACACAAATTAATGGAACTTAACTCCTGGAGAGTTGAAGAGGAAAAGAAATTAGACGAGGCACGATTGGCCCAGGAAGTAGCATTGGCAATCGCAGAGAAAGAGAAAGCAAGGAGCAAAGCAGCCCTGGAAACTGCAGAGGCAGCCAAGAGAATAGCGGAGGCTGAAGCAAACAGAAGAGCACATGCCGAAATGAAAGCCCTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGATAATCTAGCTCAAACGGATGAAAGATACAGGAAATACACATTAGAAGAGATTGAAGCAGCCACAGATTCCTTTTCTGAATCTCGAAAAATCGGGGAAGGTGGTTATGGCCCTGTCTATAAATGTTACCTTGACCACACTCCTGTGGCTGTCAAGGTTCTACGCAAAGATTCTGCTCAGGGGAAGTCGCAGTTTCAGCAAGAGATTGACATACTCAGCTGCATACGGCATCCGAATATGGTGCTTCTTGTAGGAGCATGTCCAGAGCACGGCATACTGATCTATGAATACATGGCGAATGGGAGCTTAGAAGATTGCATGATTCAGAAGAAGGGCAGTGTTCTGTCTTGGCAGCTGAGATTTCGGATTGCGGCAGACATAGCCACTGGCTTACTATTCCTCCACCAGACCAAGCCTGAACCACTGGTACACCGTGATCTAAAGCCAGGAAACATTTTATTAGACCACAACTTCGTAAGCAAGATCAGCGACGTTGGGTTGGCGAGGCTTCTCCCGGCCGTGGCAGAAAACGTGACGCAGTGCTGCATGACGTCAGCAGCGGGAACATTTTGCTACATTGATCCAGAGTATCAGCAGACCGGAATGCTTGGAGTGAAGTCTGACGTGTACTCTTTAGGGATCATTCTTCTTCAGTTGTTGACAGGAAGGGCTCCAATGGGGCTTGCTCACCAAGTTGAGAAGTCCATTGAGAAGGAGGCACTGGGTGAGATGCTTGACCCCTCTGTCCCCGACTGGCCTCTTGAAGAAGCCCTATGCCTTGCCAATCTCGCACTCAGCTGTGCAGAGCTCAGACGAAAAGATAGGCCAGACCTTGGTCAACACGTACTGCCACAGCTCAAAAAATTTAGAGACTTAGCTGAAGGGAATTCCAGCCCAACTTTCTCTTGTAGGAACATTAGTTCTGCAACATCTCCCCATCTCAGTCAAGCTTCGTCTACGCCACAGGACGTAATGAGCGAACCACCCTTTGAACATTCGGCAAGTTCAACAAGCCCCTCAAGTCCACTATTATCACCACCAGGCGAAAAAGAAGGGGCCAAGTCTGAGTAA 2439 0.4772 MWLPSTKASVIRKGGGGNGLVAVAIDKDSKGSRYALKWAADSLLARGQTVVLIHVLHKTSSPLSIGGSHAIICNSNIPSSSPQRDHVINITKDLFRTFHCYCTRKDIQCLDVLVEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRFKSSSTPSNISKGAPDFCTVYIISKGKISSVRSASRSAAHASPLLSHIQALNNDDSASETSSQLSSRRMSFKDHRRSMKPHSWQDEATRSSQVGKTMGTGAGGLSVRSSCMELLGPDSDTDISFVSSGRPSSSGRSSSVLYDCMDSSSARNSRVSTSSDRSLGSLRCSLALPTSPGPDISLSFSQESIGTSSFSHSSQNMDDVESDMKRLKLELKQTMEMYSTACREALTAQHKLMELNSWRVEEEKKLDEARLAQEVALAIAEKEKARSKAALETAEAAKRIAEAEANRRAHAEMKALKEAEEMRKLLDNLAQTDERYRKYTLEEIEAATDSFSESRKIGEGGYGPVYKCYLDHTPVAVKVLRKDSAQGKSQFQQEIDILSCIRHPNMVLLVGACPEHGILIYEYMANGSLEDCMIQKKGSVLSWQLRFRIAADIATGLLFLHQTKPEPLVHRDLKPGNILLDHNFVSKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQLLTGRAPMGLAHQVEKSIEKEALGEMLDPSVPDWPLEEALCLANLALSCAELRRKDRPDLGQHVLPQLKKFRDLAEGNSSPTFSCRNISSATSPHLSQASSTPQDVMSEPPFEHSASSTSPSSPLLSPPGEKEGAKSE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00057 812 PANTHER OS02G0152300 PROTEIN 17 784 - -
Aip04g00057 812 SMART serkin_6 481 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00057 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Aip04g00057 812 MobiDBLite consensus disorder prediction 231 245 - -
Aip04g00057 812 ProSiteProfiles Protein kinase domain profile. 481 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00057 812 PANTHER BNAA05G18880D PROTEIN 17 784 - -
Aip04g00057 812 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 170 - -
Aip04g00057 812 MobiDBLite consensus disorder prediction 199 214 - -
Aip04g00057 812 MobiDBLite consensus disorder prediction 215 230 - -
Aip04g00057 812 Pfam Universal stress protein family 21 162 IPR006016 -
Aip04g00057 812 Gene3D Transferase(Phosphotransferase) domain 1 554 758 - -
Aip04g00057 812 Coils Coil 407 472 - -
Aip04g00057 812 SUPERFAMILY Protein kinase-like (PK-like) 465 736 IPR011009 -
Aip04g00057 812 MobiDBLite consensus disorder prediction 759 812 - -
Aip04g00057 812 CDD STK_N 20 173 - -
Aip04g00057 812 Gene3D Phosphorylase Kinase; domain 1 451 553 - -
Aip04g00057 812 MobiDBLite consensus disorder prediction 759 800 - -
Aip04g00057 812 MobiDBLite consensus disorder prediction 199 249 - -
Aip04g00057 812 Pfam Protein kinase domain 482 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00057 812 Coils Coil 347 367 - -
Aip04g00057 812 Gene3D HUPs 14 170 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00057 Aip-Chr4 566215 570087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00057 1 774 Receptor kinase-like Gene Family AT1G78940 55.683 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip04g00057 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00057 - - ahf:112740428 1483.39