Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00047 ATGAAGCTACAGGCACATATTCCGGGTCAGATATCGGGTCAGGTACCTAATCAAGCAGGATCTCAGTTACCTGGACTGACCCAATTGAATGGGAATGTTCCTCCTCAGATGCCAATTATGGGTGGTGTCCCGCGTCCAACAATTAATATGGACCCTGAATTACTTAGAGCACGATCGTTTATTCAAGAGAAGATATATGATATGTTATTGCAACGACAACAGCATCCAGTTACAGAAGTACAGAGAAGGAAAGTTAAGGATCTTGCAAAACGCTTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGACTACATGAACTTGGAAACTCTAGAGAGTCGTTTATCTAATTTCCTAAGAAGAGCACACATGAATAATCACAACCAACAGTATCAACAGCTTGTTACCTCTGCTCCAATTGGTACAATGATACCAACTCCTGGTATGTCCCAAGTTCCTAATTCTAGCATGCTGGTTCCCTCTTCTATGGATGCCTCAGTGATTTCTACCAGTGGCTGCAATAGCATAGGATCAACATCTTTCAATGGTGTAAGCATGTTACCATCTGGTGGTATGCTTGGAAGTTCTGTAAATCGATCTGATGGTTTGTCCAATGGTTATCAGCAGTCTTCATCCAGCTTTTCTGTTGGGTCAGGGGGGAATATGTCAGCAATGGGGGTGCAGAGAATTGCTAGCCAAATGATTCCCACTCCTGGTTTTGGTGTCAGCAGTAATAATTCACACATGAATATAGATTCTTCCACTACTGGCAGTTCCTTTTCTGGTGTAGAGTCTACAATGGTATCGCAGCCATCACTGCAGCTGACGAAGCAGCATGGGCAAAATAGTAATGTTTTGCAGAACATTGGCAGCCAAATGGGTAGTGGAATGAGATCTGCTTTACTGCAAAAATCATTTGGGAACTCAAATGGTGCTGTAAATAGTGGACTTGGCTTGATTGGAAACAATATGCAACTTGCAAATGAACCTGGAACTACTGATGGTTATGCGCCAACCTACATTAATTCCCCTAAACACTTACAGCAGCACTTCGATCAAAATCAGCAACCAGTTGTTCAGGGTGATGGATATGGATTGAATAATGTTGACACGTTCGCTTCTGGAAATTTTTATGCATCTGCAACAACCTCTGGGTCCATGATTAATGCTCAGAACACAAATTCAGTAAAATTGCCATCAATACCCAAAACTAGTTCATTGATAAGTGGTCACTCAAATTTGCATGGTATCCAGCAGGCTGCTCATATAAAGTCTCAAGCAATTAATCAACTGGAAAAGTTGAGTTTCCAGTCTTCATTGTCTTCACGAGATGGACTTCTGCATTCGCAACAGCAACATCAGCAAAGGCCCCAACAATATCAACAGCCAGACCAGTATGCACAGCAGCAATGCCAATTGAAGCTGCAAAATCAGCAACCTCAGCATATGGTGAACAACGATACTTGCAGTCAGTCTCAACTGTCTTCTCATCTAGAGAACCGAGTGAAGCCTGAGCCGGGGGTTGAACACCATAAGGAAGTACTCAGCTCTCATGTTCCTGAACAGTTTCATTTGGCTGAGATGCAGAGTCATTTCCACCAGAACTCAGCTGAAGATTGCTCTAGGAGTGATCAACATCTTACATATCCATCTGGTGTACATGACTTAGCCTCGTCAACACCTCAAAATTCACAACAAATGTTGCACATGCACCAATTGGTTGCAGAGCCTCAGAATAATCTTAACTGTCTTACGGTTGGGGTGCAATCCAAATCTTTAGTTCTAAATCAATGGCCTCAGTCACAAGACAGTAACCATATGCCTGCAAATATTTCACATGAGCAGCATGTCCACAGGGATTTCCACCAAAGAATATCAGTGCAGGGTGAAGCTCAGTGCAATAATTTATCATCAGATGGATCGATTATTGGTCAAGCAGTTGCCCCTAGAGCTTCAGTTGATCTGATAGACTCTGGAAGTGGGGTCAAAAAGGAACACAGGAATCAGCAGAGGTGGCTTTTATTTCTACTTCATGCCCGACGGTGTCCTGCCCCTGAAGGACAGTGCCCAGAACGCTTCTGTTCTAATGCACAGAAGTTATGTAAGCACATAGATGGTTGTAACAAGGTTCACTGTTCATACGCTCGGTGTCATCATACCAGGCTTTTGATTCGTCATTACATGACCTGCAAGGATCCTTGTTGCCCTGTTTGTGTTTTCGTAAGAAATTATCGACGTGCAGTGCAACTTAAGTCTCAGATTCGGTCAGAGCATGAATCAAGTTTGCCAATTACAGCAAACGGGTCCTGTAAAACATATAATACTGTGGCCCCGTTGGCTAGATTGATCTCAAAGCCTCCATTAGCTGCTGAAACTTCAGAAGATCTACATCCATCTCTAAAACGTATAAAGACTGAGCATTGCACCATGCAATCCATGAATCCTGAAAATGACAATTCTTCATCCATTTCTGCAAATTGTGAATCTCTTATTTCCAGGGATGCACAGTCCCTGGCCTATCCAAATGCTGAGAAATCTATCTCAATTAAGTCTGAGATTGCTGAAGTTAAGGCTGAAGCTTCAGCACATTTGGTGCATGAAAAGCTTAGTGAGATGAAAATGGATAGCAATCGTTCAGATAATAAAACGTCGGGTGGTGAACCTGCCCAATATAATGAACCTGCTAATTTATGTAGGTCAGAACATGTTAAAACTGAGAAAGAAAGTGCACAAGATAAGCAAGAAAATGTGATGCAGCCATCTGAAAATGCAGCTGGAACCAAGTCTGGCAAGCCAAAAATAAAGGGTGTCTCGTTAACTGAACTATTTACGCCTGAGCAAGTCAGGGAACATATCACTGGCCTAAGGCAATGGGTTGGTCAAAGCAAATCAAAAGCAGAGAAGAACCAAGCAATGGAGCATTCGATGAGTGAGAATTCTTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCCCCACCAATCTATTGTACAACCTGTGGTGTTCGTATTAAACGAAACAATATGTATTATACCACGGGGGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGATCAGAGAACATTAACGTTGACGGGACTCCAATTCCTAAGTCAAGGTTGGAAAAGAAGAAGAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCCTGGCAACATCAAATTTGTGCCTTATTTAATGGAAGAAGAAATGACGGTGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCTTTACCCCAAAGTGCTGTTCTTGGAGCCAAAGATTTGCCACGAACCATTCTCAGTGACCACATAGAACAGCGATTATTTAAAAGACTAAAGCAAGAAAGGCAGGAAAGGGCAAGGGTTCATGGAAAATCTTATGAAGAGGTTCCAGGAGCTGAATCGCTTGTTATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGATTTTTGGAGATTTTTCAGGAAGAAAATTATCCAACAGAATTCCCATATAAATCCAAGGTAATTTTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTCTGCCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCAGTTGCCCAACCAGCGCCGGGTGTATCTTTCATATCTTGACTCTGTGAAGTATTTTAGGCCTGAGGTCAAGGCCGTAACTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCATGTCCACCATTGAAGGGTGAAGACTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTATCTGTCCATGCTGAGAAAAGCTATCAAGGAGAATATTGTAGTTGATCTCACCAACTTATATGATCATTTCTTCGTATCTACTGGTGAATCTAGGGCTAAGGTTACAGCTGCCAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCTGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGGAAACAAAATAAGAAAGGAACAACTAAAAAAACTATAACAAAAAGGGCCTTAAAAGCATCTGGTCAGTCAGATCTCTCTGGCAACGCCTCGAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAGGATTTTATCATGGTTCATCTACAGCATGCATGCAGTCATTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGCTATGAAGTGGAATTAAAACGTGAAGAGAGAGAAAGGCATCCTATTAATCAGAGGGAGAAACATACCCTTTATCCAATTGAAATCAATGATGTTCCAGTTGATACAAAGGACAAAGATGATATTCTCGAGAGTGAATTCTTTGATACTAGACAAGCATTTCTCAGTCTCTGCCAGGGAAATCATTATCAATATGATACACTTAGGCGAGCCAAGCATTCATCAATGATGGTTCTATATCATCTTCATAATCCAACCGCTCCTGCATTTGTGACTACCTGTAATATATGCTATCTTGACATAGAAACTGGCCAAGGGTGGCGCTGTGAAGTTTGTCCCGAGTATGATGTATGTAATGCTTGTTATCAAAAGGATGGAGGCATTGATCATCCCCATAAGTTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGGTTCGAGTATTGCAGCTACGGAAAATGCTTGATCTACTTGTGCATGCATCCCAATGTCGTTCCGCACATTGCCAATATCCAAATTGCCGCAAAGTAAAGGGGCTTTTCCGCCACGGGATGCACTGCAAAACACGAGCTTCTGGAGGTTGTGTTCTTTGTAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAGGAATCGGAGTGCCACGTGCCGCGTTGCAGGGATTTGAAAGAGCATTTAAGGAGATTGCAGCAACAGTCTGATTCACGGCGTAGGGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAACGCTGGATGA 5193 0.4229 MKLQAHIPGQISGQVPNQAGSQLPGLTQLNGNVPPQMPIMGGVPRPTINMDPELLRARSFIQEKIYDMLLQRQQHPVTEVQRRKVKDLAKRLEEGMLKAALSKEDYMNLETLESRLSNFLRRAHMNNHNQQYQQLVTSAPIGTMIPTPGMSQVPNSSMLVPSSMDASVISTSGCNSIGSTSFNGVSMLPSGGMLGSSVNRSDGLSNGYQQSSSSFSVGSGGNMSAMGVQRIASQMIPTPGFGVSSNNSHMNIDSSTTGSSFSGVESTMVSQPSLQLTKQHGQNSNVLQNIGSQMGSGMRSALLQKSFGNSNGAVNSGLGLIGNNMQLANEPGTTDGYAPTYINSPKHLQQHFDQNQQPVVQGDGYGLNNVDTFASGNFYASATTSGSMINAQNTNSVKLPSIPKTSSLISGHSNLHGIQQAAHIKSQAINQLEKLSFQSSLSSRDGLLHSQQQHQQRPQQYQQPDQYAQQQCQLKLQNQQPQHMVNNDTCSQSQLSSHLENRVKPEPGVEHHKEVLSSHVPEQFHLAEMQSHFHQNSAEDCSRSDQHLTYPSGVHDLASSTPQNSQQMLHMHQLVAEPQNNLNCLTVGVQSKSLVLNQWPQSQDSNHMPANISHEQHVHRDFHQRISVQGEAQCNNLSSDGSIIGQAVAPRASVDLIDSGSGVKKEHRNQQRWLLFLLHARRCPAPEGQCPERFCSNAQKLCKHIDGCNKVHCSYARCHHTRLLIRHYMTCKDPCCPVCVFVRNYRRAVQLKSQIRSEHESSLPITANGSCKTYNTVAPLARLISKPPLAAETSEDLHPSLKRIKTEHCTMQSMNPENDNSSSISANCESLISRDAQSLAYPNAEKSISIKSEIAEVKAEASAHLVHEKLSEMKMDSNRSDNKTSGGEPAQYNEPANLCRSEHVKTEKESAQDKQENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERQERARVHGKSYEEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQLPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAIKENIVVDLTNLYDHFFVSTGESRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPINQREKHTLYPIEINDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQVRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00047 1730 ProSiteProfiles Zinc finger TAZ-type profile. 661 742 IPR000197 -
Aip04g00047 1730 Gene3D - 1428 1488 IPR043145 -
Aip04g00047 1730 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 141 1729 - -
Aip04g00047 1730 SUPERFAMILY RING/U-box 1412 1485 - -
Aip04g00047 1730 MobiDBLite consensus disorder prediction 900 914 - -
Aip04g00047 1730 Pfam Histone acetylation protein 1154 1374 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aip04g00047 1730 ProSiteProfiles Zinc finger ZZ-type profile. 1552 1605 IPR000433 GO:0008270
Aip04g00047 1730 SUPERFAMILY RING/U-box 1533 1601 - -
Aip04g00047 1730 MobiDBLite consensus disorder prediction 443 500 - -
Aip04g00047 1730 Gene3D TAZ domain 659 747 IPR035898 -
Aip04g00047 1730 MobiDBLite consensus disorder prediction 1378 1402 - -
Aip04g00047 1730 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1114 1550 IPR031162 GO:0004402
Aip04g00047 1730 SUPERFAMILY TAZ domain 667 746 IPR035898 -
Aip04g00047 1730 MobiDBLite consensus disorder prediction 869 934 - -
Aip04g00047 1730 MobiDBLite consensus disorder prediction 443 501 - -
Aip04g00047 1730 Gene3D TAZ domain 1609 1726 IPR035898 -
Aip04g00047 1730 ProSiteProfiles Zinc finger TAZ-type profile. 1612 1695 IPR000197 -
Aip04g00047 1730 SMART KAT11_2 1147 1444 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aip04g00047 1730 ProSitePatterns Zinc finger ZZ-type signature. 1557 1584 IPR000433 GO:0008270
Aip04g00047 1730 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1049 1097 IPR013083 -
Aip04g00047 1730 SMART TAZ_2 1615 1693 IPR000197 -
Aip04g00047 1730 SMART TAZ_2 665 742 IPR000197 -
Aip04g00047 1730 ProSiteProfiles Zinc finger ZZ-type profile. 1432 1495 IPR000433 GO:0008270
Aip04g00047 1730 CDD PHD_HAC_like 1024 1096 - -
Aip04g00047 1730 Pfam PHD-finger 1055 1097 IPR019787 -
Aip04g00047 1730 Pfam TAZ zinc finger 1622 1692 IPR000197 -
Aip04g00047 1730 Pfam TAZ zinc finger 671 739 IPR000197 -
Aip04g00047 1730 Pfam Zinc finger, ZZ type 1554 1593 IPR000433 GO:0008270
Aip04g00047 1730 ProSitePatterns Zinc finger PHD-type signature. 1025 1096 IPR019786 -
Aip04g00047 1730 SMART zz_5 1551 1597 IPR000433 GO:0008270
Aip04g00047 1730 SMART zz_5 1431 1475 IPR000433 GO:0008270
Aip04g00047 1730 SUPERFAMILY TAZ domain 1614 1697 IPR035898 -
Aip04g00047 1730 Gene3D - 1551 1603 IPR043145 -
Aip04g00047 1730 SUPERFAMILY FYVE/PHD zinc finger 1058 1098 IPR011011 -
Aip04g00047 1730 PANTHER CBP/P300-RELATED 141 1729 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00047 Aip-Chr4 481372 491455 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aip04g00047 HAT_KAT11 1.6e-33 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00047 K04498 - gmx:100809207 2951