Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00042 ATGGCCTCAACGTGTTCCATCTCCATGGTTATGATAGCGATGATGCTACAATGTCTATTATGTGAAGCGATGGCCACCAGCACAAAGAAAACTTACATAGTTCACATGAAACACAAACATCACAACCCTTCCAAGCGAGACTGGTACACAGCAACACTTGAATATCATAACTCCCACTCCGATTCCCTGCTCTACTCATACGAAACCGCTTATAATGGCTTTGCCGCTTCCCTCAGCAAGGACCAGGCACAGTTACTACGCCGTTCCGATTCGGTGCTTGCGGTTTACGAGGACACACGCTACACCCTCCACACAACAAGGACACCGGAGTTCTTGGGCCTCCAGAAGGCTTCAAACTTGTGGGAAGGCCACACCATTCAGGATCTCGACCATGCTTCCAACGACATTATCATCGGAATCCTCGACACCGGGGTGTGGCCGGAGACAAACAGCTTCGACGATTCCGGCATGCCTCCGGTTCCCACAAGGTGGCGCGGACAATGCGAGCCAGCTCCGGATTTCGATCCTTCCCTATGTAACAGAAAGCTCATTGGCGCCAGGACTTTCTCCAAGGGCTACTTATTGTCCTCCGGTGGCGGTTACATGGTTAGGGAGAAGGACCAAGTGTCTCCACGCGACCGTGAAGGACATGGAACCCATACTGCTACTACTGCTGCAGGCTCCGCCGTCCCCAACGCCACTTTACTTGGTTACGCCACTGGAACGGCGCGTGGTATGGCACCACAGGCGCGCATCGCGGCGTACAAGGTCTGCTGGACAGGCGGCTGCTATGCCTCCGACATTCTCGCGGGGATTGATCAAGCGATCCAGGACGGCGTCGACGTGCTCTCGCTCTCTCTCGGAGGCTCCTCCACCGCCTACCACCGGGACACCATTGCCATTGGAACCTTCGCGGCGGTGCAGAAAGGAATCTTCGTGGCCTGCTCGGCAGGGAACAATGGTCCTCGTCAGGGATCTGTCGCCAATGTGGCTCCCTGGGTGATGACCGTCGGAGCCGGAACCCTAGATCGGGATTTCCCAGCTTATGTTAAAATCGGAAATGGAAAACGATTCAGCGGTGTTTCTCTTTACGGTGGAGAAGGTTTAGGAGACGAACCGGTCGGATTGGTTTATTTCACCGATAAATCCAATTCGTCGAGCAGCGTTTGCTTGCCCGGTTCGCTGGAACCGTCGCTTGTGCGAGGGAAGGTGGTGGTTTGCGACAGAGGGCTCAATGCGCGGGCGGAGAAGAGTGCGGTGGTGAGAGAAGCTGGAGGTGTGGGGATGATACTGGCGAACACGGCGGCGAGCGGCGAGGAAGTGGTGGCGGACAGCCATCTTGTACCGGCCGTAGCTGTGGGGAGAAGCGCGGGAGATGAGATCAGAGAGTACGCTTCGTTGGATCCTAATCCAACGGCTGTGCTTAGCTTCGGTGGAACTGTTCTGAACGTGAGGCCTTCGCCAGTTGTGGCCGCGTTCAGTTCCCGTGGGCCCAATGGAGTTACGCCTCAGATTCTTAAGCCCGATATTATTGGGCCTGGTGTTAACATTTTGGCGGGATGGTCCGAGGCTGTTGGCCCGTCTGGGTTAACGAAGGATACTCGCAAAACCCAATTCAATATCATGTCAGGTACGTCAATGTCATGTCCACACATAAGCGGATTGGGTGCGTTGTTGAAAGCAGCCCATCCAGATTGGAGTCCAAGTGCCATCAAATCGGCACTCATGACAACTGCTTCTACACACGACAACACCAACTCCCCTTTTAAGGATGCTGCCGGAGGAGACTTTTCAACCCCCTGGGCTCATGGTGCCGGGTATGTGAACCCACAAAAGGCATTCTCTCCAGGGCTTGTGTACGACGCAACCACCGATGATTACGTTGCCTTCTTGTGCTCCTTGGACTACTATACGCCTGAGACTATACAGCTTATTGTTAAGAATCCCAACGTGAATTGTTCCGTGAGATTTGATGAGGCGGGGCAGTTGAACTACCCGTCGTTTTCGGTTGTGTTTGGGACCAAGAAGAGGGCTGTTGCGTACACTCGGACGTTGACCAATGTTGGGGCAGCAGGATCCGTGTATGATGTGGATGTTGATGGACCATCCGTCGTGGCAATAACGGTGAAGCCCACAAGGCTTGTGTTCGCCCAAGTTGGGGAAAAGCAATCTTACACGGTCACCTTTGTGTCCAACAAGAGTGCTGATGATTACTCGCTTCTTTCCAAATTCGGTAGCATTGTGTGGAGCAATCAAGTGCACCAAGTTAGGAGCCCAGTTGCTTTTGCATGGACTGATGATTCGTGA 2307 0.5375 MASTCSISMVMIAMMLQCLLCEAMATSTKKTYIVHMKHKHHNPSKRDWYTATLEYHNSHSDSLLYSYETAYNGFAASLSKDQAQLLRRSDSVLAVYEDTRYTLHTTRTPEFLGLQKASNLWEGHTIQDLDHASNDIIIGILDTGVWPETNSFDDSGMPPVPTRWRGQCEPAPDFDPSLCNRKLIGARTFSKGYLLSSGGGYMVREKDQVSPRDREGHGTHTATTAAGSAVPNATLLGYATGTARGMAPQARIAAYKVCWTGGCYASDILAGIDQAIQDGVDVLSLSLGGSSTAYHRDTIAIGTFAAVQKGIFVACSAGNNGPRQGSVANVAPWVMTVGAGTLDRDFPAYVKIGNGKRFSGVSLYGGEGLGDEPVGLVYFTDKSNSSSSVCLPGSLEPSLVRGKVVVCDRGLNARAEKSAVVREAGGVGMILANTAASGEEVVADSHLVPAVAVGRSAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTPQILKPDIIGPGVNILAGWSEAVGPSGLTKDTRKTQFNIMSGTSMSCPHISGLGALLKAAHPDWSPSAIKSALMTTASTHDNTNSPFKDAAGGDFSTPWAHGAGYVNPQKAFSPGLVYDATTDDYVAFLCSLDYYTPETIQLIVKNPNVNCSVRFDEAGQLNYPSFSVVFGTKKRAVAYTRTLTNVGAAGSVYDVDVDGPSVVAITVKPTRLVFAQVGEKQSYTVTFVSNKSADDYSLLSKFGSIVWSNQVHQVRSPVAFAWTDDS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00042 768 Pfam Peptidase inhibitor I9 31 104 IPR010259 -
Aip04g00042 768 CDD Peptidases_S8_3 101 580 IPR034197 -
Aip04g00042 768 PANTHER CUCUMISIN-RELATED 21 765 - -
Aip04g00042 768 Pfam PA domain 390 461 IPR003137 -
Aip04g00042 768 ProSiteProfiles Serine proteases, subtilase domain profile. 111 614 - -
Aip04g00042 768 Gene3D - 631 764 - -
Aip04g00042 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 104 IPR037045 -
Aip04g00042 768 Gene3D Peptidase S8/S53 domain 135 627 IPR036852 GO:0004252|GO:0006508
Aip04g00042 768 CDD PA_subtilisin_like 349 473 - -
Aip04g00042 768 SUPERFAMILY Subtilisin-like 103 618 IPR036852 GO:0004252|GO:0006508
Aip04g00042 768 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Aip04g00042 768 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Aip04g00042 768 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Aip04g00042 768 SUPERFAMILY Protease propeptides/inhibitors 30 102 - -
Aip04g00042 768 Pfam Fibronectin type-III domain 662 761 IPR041469 -
Aip04g00042 768 Pfam Subtilase family 134 587 IPR000209 GO:0006508|GO:0008236
Aip04g00042 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 765 IPR045051 -
Aip04g00042 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Aip04g00042 768 Gene3D - 343 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00042 Aip-Chr4 407077 410108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00042 19 764 Subtilisin-like Serine Gene Family AT2G05920 64.181 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00042 - - adu:107457896 1502.26