Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00034 ATGGCCGCTGCTCTTTTCTTTTTCTTCCTCTTCCTCCTTCCTCTCCCTTCCTTCTCCATCACCGACGGCGAAGCCTTACTCAAACTCAAACAAGCCCTCAACAACCCTCCTGCCCTCTCCTTATGGGTCCCAAACAAGGACCCTTGCGCCCTCCCCCTCTGGGTTGGCGTCCTCTGCGCTAAGGGCACCATCAACGGCATCAACCTCGCCAACATGGGACTCTCCGGCACCATCGACGTCGACGCCCTCTTGCAAATCCCCTCCCTCAGGACCATCAGCCTCATCAACAACTCATTATCCGGCCCCATTCCCGACCTCAACAGGATCGGCGCCCTCAAAGCCATTTACCTCAACACCAACCAATTCTCCGGTTCCATTCCGCCTGATTACTTCGACAAGTTAGCCTCCTTGAAGAAGCTATGGCTCTCCGACAATAAATTCTCCGGTAACATACCCATATCATTGACCAAGCTTCGCTTCCTTTCCGAGTTGCGCCTCGACAAAAACGACTTCTCAGGGACTCTACCTGACTTCACCCAACCAATAAGAATCCTCGACTTTTCCAACAACAAGCTAGAAGGTCCAATACCACCATCCATGGCGGGCTTTGACGCTAGTGTCTTCGCCGGGAATCCAGCTCTCTGCGGGAAGCCTCTCAAGGAATGCGGCGGTGGGGACGCCTCTCCTTCTGAGCCGGCGAGCTCTGGGGGCAGCGCCGGCGGTGGATTGAGTTGGTTCTGGAAGATCCTGATTGTCATTCTGCTGGCGGCGATTCTGGCGGGAGTGTTCGTGTTGGTGAAGAATCGGCGGGACCAAAGCGATAACTTCAGCGTGATGAGCAGAGGAAACAGCCACGTGGACGAGGAGGTGATGCAGGTGCACGTGGCGAAGAGCGTTAAGGGATCAGAAGGGGGCAGCGGCACAGGCATTGGTGGAAAGAGAGGAGGTGGCGGGAGAGGGGGGATGGGTGACCTCATAATGGTGAACGATGAGAAGGGCGTGTTTGGGCTGACGGACTTGATGAAGGCGGCAGCGGAGGTGCTGGGGAACGGGGGACTAGGGTCGGCGTACAAGGCGGCGATGGCGAACGGGATATCGGTGGTGGTTAAGAGGATGAGGGAGATGAATAAGGTGAGCAGAGACATATTCGACGCGGAGATGAGACGGTTTGGAAGGATCAGAAACCGTAACATCCTGACTCCTCTTGCTTACCATTATCGCAAGGAGGAGAAGTTGTTTGTGACGGAATACATCCCCAAAGGAAGCTTGCTTTATGTGCTTCATGGAGATAGAGGATCCAGCCATGGCGAACTCACCTGGCCAACACGTTTCGCCATTGTCAAGGGAATCGCAAAAGGTTTGAGTTTCCTCTACACTGAATTTTCAACCGAAGAGCTTCCCCATGGGAACCTCAAATCCAGCAACATTCTCCTCACCAACCAGTATGAGCCTCTCCTCAGCGACTATGGATTCCATTCGCTCATGAATCCCAACTACGCCATTCAAACCTTGTTTGCCTACAAAACTCCAGACTACACCGAATACAAACACGTGTCTCAGAAGACCGATGTGTACTGCCTTGGCATCATCATTCTGGAGATCATAACCGGCAAGTTCCCCTCTCAGTATCACAGCAATGGCAAGGGCGGCACCGATGTTGTGCAGTGGGTGTCCACCGCCATTTCCGAGAAAAGAGAGGCGGATTTAATCGACCCGGACTTGCACCCTAACAACAGCTCTCTCCCTCAGATGCTGCAGCTCGTCCGCATTGGAGCTGACTGCACGGAACCCAACCCCCAACGACGTCTTCCCATGAAGGAAGCCATTAGGAGGATAGAGGAACTTCAGCTTTAA 1854 0.5383 MAAALFFFFLFLLPLPSFSITDGEALLKLKQALNNPPALSLWVPNKDPCALPLWVGVLCAKGTINGINLANMGLSGTIDVDALLQIPSLRTISLINNSLSGPIPDLNRIGALKAIYLNTNQFSGSIPPDYFDKLASLKKLWLSDNKFSGNIPISLTKLRFLSELRLDKNDFSGTLPDFTQPIRILDFSNNKLEGPIPPSMAGFDASVFAGNPALCGKPLKECGGGDASPSEPASSGGSAGGGLSWFWKILIVILLAAILAGVFVLVKNRRDQSDNFSVMSRGNSHVDEEVMQVHVAKSVKGSEGGSGTGIGGKRGGGGRGGMGDLIMVNDEKGVFGLTDLMKAAAEVLGNGGLGSAYKAAMANGISVVVKRMREMNKVSRDIFDAEMRRFGRIRNRNILTPLAYHYRKEEKLFVTEYIPKGSLLYVLHGDRGSSHGELTWPTRFAIVKGIAKGLSFLYTEFSTEELPHGNLKSSNILLTNQYEPLLSDYGFHSLMNPNYAIQTLFAYKTPDYTEYKHVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVSTAISEKREADLIDPDLHPNNSSLPQMLQLVRIGADCTEPNPQRRLPMKEAIRRIEELQL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00034 617 Gene3D Ribonuclease Inhibitor 21 130 IPR032675 -
Aip04g00034 617 ProSiteProfiles Protein kinase domain profile. 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00034 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 617 - -
Aip04g00034 617 SUPERFAMILY Protein kinase-like (PK-like) 346 612 IPR011009 -
Aip04g00034 617 Gene3D Ribonuclease Inhibitor 131 223 IPR032675 -
Aip04g00034 617 Gene3D Transferase(Phosphotransferase) domain 1 418 617 - -
Aip04g00034 617 PANTHER LRR RECEPTOR-LIKE KINASE 5 617 - -
Aip04g00034 617 SUPERFAMILY L domain-like 19 203 - -
Aip04g00034 617 Gene3D Phosphorylase Kinase; domain 1 337 417 - -
Aip04g00034 617 Pfam Protein kinase domain 346 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00034 617 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00034 Aip-Chr4 375517 377635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00034 1 617 Receptor kinase-like Gene Family AT3G42880 47.040 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip04g00034 Pkinase 5.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00034 - - gmx:100816925 786.178