Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00032 ATGTCCAGCTCATCGGAGTATTCTGGAGTTTCCGGCCAAAATCCGGTCAAGTCGCCGGAGATCTCCACGTTTTCCCAGACTTGTAATCGGTTGAGCCAATACCTCAGAGAAAACGGTTCCTTCGGTGACCTCACCCTCGGCATAACAAAACGCAACCCCGCCCCTGAAACACACGGGTCACCTGAGAATTCATGCTATTCTGCAACAACCATGGAGTTATTTCCCACAAAGGAGAACAATAATGTGACAACCATGGATCTTCTTTATCCACGTGCTCCTGCTTATGCTCCAGCCCCGGTAAACACAAGTGCATTCAAGGATGGTAAAGGTGCACAAGGGAACTCTTCTGCATGCGCTTCTACTCAGCACACCCGGCCTTACTTGTTTCAACCCCATTCCCAGCTACAGTCCGCACCTGTTGTTGGTGATCTACCTATTGCAAGGAAGGCTTCGCTGCATCGGTTCCTGGAGAAGAGAAAGGATAGAATTGCTTCAAAAGCACCATATCAAACCAGCAGCCCCGTCTCGGTCCCTAATAAAGCAGCTGAGTCGTCTATGGCATGGCTTGGGTTAGGAGCTTAA 582 0.4983 MSSSSEYSGVSGQNPVKSPEISTFSQTCNRLSQYLRENGSFGDLTLGITKRNPAPETHGSPENSCYSATTMELFPTKENNNVTTMDLLYPRAPAYAPAPVNTSAFKDGKGAQGNSSACASTQHTRPYLFQPHSQLQSAPVVGDLPIARKASLHRFLEKRKDRIASKAPYQTSSPVSVPNKAAESSMAWLGLGA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00032 193 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 104 191 IPR040390 -
Aip04g00032 193 Pfam Jas motif 145 170 IPR018467 -
Aip04g00032 193 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 81 IPR040390 -
Aip04g00032 193 PANTHER PROTEIN TIFY 10A-LIKE 104 191 - -
Aip04g00032 193 PANTHER PROTEIN TIFY 10A-LIKE 21 81 - -
Aip04g00032 193 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00032 Aip-Chr4 358843 360364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00032 1 193 Tify Gene Family AT1G19180 32.549 2.59e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip04g00032 Jas_motif 1.4e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00032 K13464 - gmx:100527510 176.022