Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00021 ATGGCAAAAGGAGGGAAGCTTACAAAGCTGAAGTCAGTGCTGAAGAAATGGAACTCATTTGGCAGCAACAGCAGCGGCGGCGGGAGCAGCAAGCAGAGCCGGCACAACAGCAGCGCGGTGGCAGACGACGTGGAGGGGGAAGAGCTCCACCCGGTGTACGTTGGGAAGTCACGGAGGCTGTACCGCGTGTCGTCGGACGTGGTGGAGCACCCAGTGTTCCGCGAACTGGTGGAGAGGTCACGTGAGGAGCACGATCCTCAGCAAGTGGCGACACGCGTTGCCTGCGAGGTCGTCCTCTTCGAGCATCTGCTGTGGATGCTGGAAAATGCCGATCCCCAACCCGAGTCCCTCGACGAACTTGTCGACTTCTATGCCTGCTag 381 0.5958 MAKGGKLTKLKSVLKKWNSFGSNSSGGGSSKQSRHNSSAVADDVEGEELHPVYVGKSRRLYRVSSDVVEHPVFRELVERSREEHDPQQVATRVACEVVLFEHLLWMLENADPQPESLDELVDFYAC 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00021 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 126 IPR003676 GO:0009733
Aip04g00021 126 Pfam Auxin responsive protein 10 107 IPR003676 GO:0009733
Aip04g00021 126 PANTHER SMALL AUXIN-UP RNA-RELATED 4 126 - -
Aip04g00021 126 MobiDBLite consensus disorder prediction 18 37 - -
Aip04g00021 126 MobiDBLite consensus disorder prediction 18 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00021 Aip-Chr4 274368 275315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00021 7 111 Calmodulin-binding Proteins AT2G24400 28.333 1.14e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00021 - - gmx:100808463 170.244