Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00017 ATGGGAAGAGAAGCACCAAAGCAGCAGCAGCCGCCGGTTGCATACACAGTAGAGCAGCTTGTTGCCGTAAATCGATATAATCCCGATATTCTTGCCGATCTCGAAAACTATGTCAACGAACAGGTTTCGTCGCAAACCTACAGCCTCGACGCAAATCTCTGCCTTCTTCGCCTCTACCAGTTTGAACCGGATAAGATGAGTTCTCAGATTGTAGCCCGCATTTTGGTTAAGGCCCTTATGGCAATGCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTGATTCCTGAGCGGGTGCAAATGGAGGAGCAGTTTAAGACACTGATTGTTCTGTCACACTATTTGGAGACAGGAAGGTTTCGTCAGTTCTGGGATGAAGCAGCAAAAAATCGTCATATAGTTGATGCCGTTCCAGGATTTGAGCAGGCAGTCCAAGGCTATGCTATTCATGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAACTGTGCTTGCTGAGGCAATCAACATAGAAGGTTTATCCTTGGACAAATTCCTCGAGCACCAAGTAGCCAACTATGGTTGGGTCATAGAGAAGAGCCAAGGCAAGGGTCAGCTCATTGTCCTTCCCAAAAATGAATTTAATGACCCAGTTTTGAAGAAAAATTCCTCAGATAGTGTACCATTGGAGCATATTACTCGCATCTTTCCCATTCTTAGTTGA 699 0.4535 MGREAPKQQQPPVAYTVEQLVAVNRYNPDILADLENYVNEQVSSQTYSLDANLCLLRLYQFEPDKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRHIVDAVPGFEQAVQGYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANYGWVIEKSQGKGQLIVLPKNEFNDPVLKKNSSDSVPLEHITRIFPILS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00017 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 4 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Aip04g00017 232 SUPERFAMILY "Winged helix" DNA-binding domain 137 229 IPR036390 -
Aip04g00017 232 Gene3D - 128 231 IPR036388 -
Aip04g00017 232 Gene3D ARM repeat; domain 1 12 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Aip04g00017 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Aip04g00017 232 SUPERFAMILY ARM repeat 14 135 IPR016024 -
Aip04g00017 232 Pfam CSN8/PSMD8/EIF3K family 67 194 IPR033464 -
Aip04g00017 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 4 231 - -
Aip04g00017 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00017 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 73.504 1.73e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00017 K15028 - gmx:100306445 410.994