Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05036 ATGGATAACGAGGTGTTAGAATTTGATATTGGGCTGGAAGGAGGGGAGGGAGAATGCGAGGATGATGAGGGCGACATTGAGCACCCTATGGCTATGGCCATGGCTATCGAAGAGGATGAACTGGCTGATGCTGACAGAGGCAGAGGCACTGCCACTAGTGGTAGCGGTGGAGAAATTTACGTTCCTGAGGGTTTTGGTGCGGGTGACCTCTTAGATCTTGAACCTTACGAGGGCATGGAATTTGAGTCTGAGGAGGCTGCCAAGGCCTTCTACAATTCTTATGCCCGTCGTGTCGGGTTCAGTACTCGGGTTAGCTCATCCCGGCGTTCCAGGCGCGATGGAGCCATCATACAGAGGCAATTTGTTTGTGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGGGAGATCAAGCGTCCTCGAACCATTACCAGAGTCGGATGCAAAGCGGCTTTGTCGGTCAAAATGCACGACTCTGGCAAGTGGATCGTCTCTGGGTTTGTTAGGGAACACAACCACGAGCTTGTTCCACCGGATCAGGTGCACTGCCTTCGCTCTCACAGACAAATATCTGGAGCTGCCAAGACGCTAATTGATACTTTACAGGCTGCTGGAATGGGTCCTCGGAGAATTATGTCAGCACTGATCAAGGAGTGTGGTGGGATTAGCAAAGTTGGTTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTCTAGAAGGCGACATTCAGCTTGTTCTGGATTATTTGAGACAAATGCATGCCGAAAACCCTTGTTTCTTCTATGCTGTGCAAAGTGATGAGGACCAGTCCATGAGCAATGTTTTCTGGGCCGATCCCAAGGCAAGGTTGAATTACACTTTTTTTGGTGATACCGTAACCTTTGACACTACTTACCGAtccaataggtatcgactaccgtttgctccctttactggtgtaaaccatcatggacaacctgttctctttggttgtgctttcctaataaatgaatctgaagcatcatttgtatggcttttcaagacgtggcttatggctatgtctggacgcccaccattgtcaataacaaccgatcatgattctgtaattcggtcagctgtactacaagtattccctgagacccgccaccgattctgcaaatggcacattTTTAAAAAATGCCAGGAGAAGTTATCTCACATTTTCCTCAAATATCCAAATTTCGAAGTCGAATTTCACAGATGTGTTAACTTGACGGAGTCAATTGAGGAATTTGAATCTTGCTGGTCAACACTCATCGATAGGTATGATCTGCGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGTAAGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCTATCACACAGCGAAGCGATGGCATGAACTCATACTTTGATGGGTATGTAAATGCTTCAACCAACTTAAATCAGTTCTTCAAGTTGTATGAGAAAGCACTGGATAGTCGCAATGAGAAAGAAGTCAGAGCAGATTATGACACAATGAATAGTTCACCAGTTTTGAAGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACACGAAAGATTTTCATGAGGTTCCAAGAGGAGCTAGTTGGGACGCTAACATTCATGGCATCCAAAACCGAGGATGATGGGGAGGTCGTTACATATCATGTAGCTAAATTTGGAGAGGATCATAAGGCATACTATGTTAAATTCAATGTTTTAGAGATGAAAGCGAGTTGTAGTTGCCAAATGTTTGAATTTTCTGGCCTTGTTTGTAGACATGTTTTGGCAGTGTTTAGAGTAACCAATGTACTTACTCTACCCGCTCATTATATATTGAAACGTTGGACGAGAAATGCCAAAAGCAGTGTAACATTAGAAGAACATTCTTGTGATATATATTCTTACTATTTGGAATCTCATACAGTTAGATATAATACCCTCAGACACGTGGCCTTTAAGTTTGTTGATGAAGGAGCAAAGTCTCCTGAGACTTATGATGTTGCAATGGGTGCTTTACAAGAGGCCACAAAAAGAGTTGTTCAAGTAATGCAAAGTGAGGGACGAATTCTCATCAACAATGGCAAAGTTAGGAGTCACTTGCAAATTGATGAAAGTCATACTAATTCCAGAAGTGGACACGAGGAAGGAAACTTGGGCCAGCATATGTCCGAGGATGACATGGACAAGAGCATTAGAGAACTTATGAATGAGCTTGAGTTTGCAAATCGAAAGTGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCATAAGTTAGAGTTGTCGATTAAGGTGGAAAACATCAAGATAAGCATTAAAGATGGCCTCTAA 2394 0.3897 MDNEVLEFDIGLEGGEGECEDDEGDIEHPMAMAMAIEEDELADADRGRGTATSGSGGEIYVPEGFGAGDLLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKAALSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKECGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPCFFYAVQSDEDQSMSNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPLSITTDHDSVIRSAVLQVFPETRHRFCKWHIFKKCQEKLSHIFLKYPNFEVEFHRCVNLTESIEEFESCWSTLIDRYDLRDHEWLQAIYSACKQWVPVYLRDTFFAEMSITQRSDGMNSYFDGYVNASTNLNQFFKLYEKALDSRNEKEVRADYDTMNSSPVLKTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKTEDDGEVVTYHVAKFGEDHKAYYVKFNVLEMKASCSCQMFEFSGLVCRHVLAVFRVTNVLTLPAHYILKRWTRNAKSSVTLEEHSCDIYSYYLESHTVRYNTLRHVAFKFVDEGAKSPETYDVAMGALQEATKRVVQVMQSEGRILINNGKVRSHLQIDESHTNSRSGHEEGNLGQHMSEDDMDKSIRELMNELEFANRKCEIYRSNLLSVLKAVEDHKLELSIKVENIKISIKDGL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05036 797 MobiDBLite consensus disorder prediction 720 740 - -
Aip03g05036 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 763 IPR031052 GO:0006355
Aip03g05036 797 Pfam MULE transposase domain 302 395 IPR018289 -
Aip03g05036 797 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Aip03g05036 797 SMART 26again6 593 620 IPR006564 GO:0008270
Aip03g05036 797 Coils Coil 740 767 - -
Aip03g05036 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 59 763 - -
Aip03g05036 797 Pfam SWIM zinc finger 570 616 IPR007527 GO:0008270
Aip03g05036 797 Pfam FAR1 DNA-binding domain 90 181 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05036 Aip-Chr3 134956342 134960388 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g05036 MULE 6.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05036 - - adu:107496170 1568.13