Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05031 ATGGGCAACACATGCCGTGGATCTTTGAGAGGAAAATATTTTCAGGGCTTCAGCCAGCCCGAAGACCCCTCCAGGCGCAGCAATCCTTCTGACCCCTCCGACTCAGAGCACCTCCCCAAGCAGAATCCCAATTCAGCAGACAACAACAACAACAGCAACAACAACAACAACATCAACATCAACAACAACAAGAGAAATCTACCCTTCAAGAAGGACACCATCATGCGCAGAGGCCCCGACAACCAAGCTTATTATGTCCTGGGTCATAAGACTCACAACATTCGTGATCTCTACACTCTTGGCCGCAAACTGGGTCAGGGCCAATTTGGCACCACTTATTTATGCACCGAGAATTCCACCAACATCGAATACGCATGTAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAGGACGTGGAAGACGTTAGGAGAGAAATTCAAATAATGCACCATTTAGCTGGTCACAAGAACATCGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTACGTCCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAAAGGGGCCACTACACCGAGAGGAAGGCTGCTGAGTTGACCAAAATCATTGTTGGAGTTGTTGAGACTTGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTATTCACTGACGTGGTTGGCAGTCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGCCCCGAAGCAGATGTGTGGACAGCGGGCGTCATTCTATACATACTACTTAGTGGAGTGCCGCCGTTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGGCATATAGATTTCGACTCTGATCCATGGCCTTTAATTTCTGATAGTGCTAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCTGACAGAGCATTGGACCCTGCTGTTCTTTCCCGCCTTAAACAGTTCTCTGCAATGAACAAACTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAGATGTTTCAAGCTATGGATACTGATAACAGTGGTGCAATTACTTTTGATGAGCTTAAAGCTGGTCTAAGAAGATATGGGTCAACCCTTAAGGATACAGAAATACGTGATCTTATGGAGGCGGCTGATGTGGACAATAGTGGGACTATAGATTATGGAGAGTTTATCGCTGCAACAATTCATCTCAACAAGCTAGAGCGCGAGGAACATCTCATTGCAGCATTTCGATATTTTGACAAGGATGGGAGTGGCTATATTACAGTTGACGAACTTCAACAAGCTTGTATAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGAGATGCACCAGGTGTCTGATTCTCATCGGTGCAGGTTGTACAGCAAAATCCAGAAAGAGAAAAATAGAGCATGA 1656 0.4438 MGNTCRGSLRGKYFQGFSQPEDPSRRSNPSDPSDSEHLPKQNPNSADNNNNSNNNNNININNNKRNLPFKKDTIMRRGPDNQAYYVLGHKTHNIRDLYTLGRKLGQGQFGTTYLCTENSTNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFRYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYEMHQVSDSHRCRLYSKIQKEKNRA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05031 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 58 528 - -
Aip03g05031 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Aip03g05031 551 SUPERFAMILY EF-hand 380 528 IPR011992 -
Aip03g05031 551 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Aip03g05031 551 SMART serkin_6 98 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g05031 551 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Aip03g05031 551 Pfam Protein kinase domain 98 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g05031 551 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Aip03g05031 551 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
Aip03g05031 551 SMART efh_1 439 467 IPR002048 GO:0005509
Aip03g05031 551 SMART efh_1 403 431 IPR002048 GO:0005509
Aip03g05031 551 SMART efh_1 475 503 IPR002048 GO:0005509
Aip03g05031 551 SMART efh_1 509 536 IPR002048 GO:0005509
Aip03g05031 551 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Aip03g05031 551 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Aip03g05031 551 SUPERFAMILY Protein kinase-like (PK-like) 80 380 IPR011009 -
Aip03g05031 551 Pfam EF-hand domain pair 474 528 IPR002048 GO:0005509
Aip03g05031 551 Pfam EF-hand domain pair 404 464 IPR002048 GO:0005509
Aip03g05031 551 Gene3D Transferase(Phosphotransferase) domain 1 184 366 - -
Aip03g05031 551 CDD STKc_CAMK 98 355 - -
Aip03g05031 551 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 58 528 - -
Aip03g05031 551 MobiDBLite consensus disorder prediction 34 68 - -
Aip03g05031 551 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Aip03g05031 551 Gene3D - 382 528 - -
Aip03g05031 551 ProSiteProfiles Protein kinase domain profile. 98 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g05031 551 MobiDBLite consensus disorder prediction 1 69 - -
Aip03g05031 551 Gene3D Phosphorylase Kinase; domain 1 100 183 - -
Aip03g05031 551 Gene3D - 372 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05031 Aip-Chr3 134900416 134905782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g05031 1 528 EF-hand Containing Proteins AT2G17290 82.959 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip03g05031 Pkinase 2.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05031 K13412 - gmx:100778173 935.25