Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05028 ATGGCATCTAGAGCTTCTAATGTCGATCTCTTTGATGCTTATTTTCGGCATGCTGATTTGGACCACGACGGCCGCATCAGTGGCACCGAAGCTGTCTCCTTCTTCCAAGGCTCTGGTTTGCCCAAGCAGGTCCTCGCTCAGATTTGGGCTTTTGCAAACCAAAGCCAGAGTGGATTCCTTGGTCGGGCAGAGTTTTACAATGCCCTTAAGCTTGTCACTGTAGCGCAAAGTAAACGGGAGCTTACTCCTGAAATAGTAAAAGCAGCATTATATGGTCCAGCTACATCTAAAATACCTGCACCTCAAATCAATTTTAGTGCCACAGTTGCACCCCAACTGAATTCTTCTGCACCTACGCCTTCACCTATGCCCACCACCACAGCTACACCTGCATCTGCACCTGCATCTACATCTGCATCTGCATCTGCATCACAGAGTAATATTAATTCTATGCCCCATCAAAATGTTGGACTAAGAGGGCCACTCCCAAGTTTAAGTGGAAACCAGCAAAATCTTCCTTACCCGGGAAGCCCATTAGTGAAGCCAACACAAAATATCCCTGATAGTGCTTCTAATCTAGCACCTGGTATTGCCAATCAGGGAATCCGTGGAGTGATGGCTGGTGGAGGACCTCATGCTGAAACTCATGGCATACAAAGTGATGGGTCCACTCCCCAGATGGTTGGTGTTCCAGCGGTAACATCCTCTCTAATAGCACCTAGAGGAAGTAGTCCCACATCTACTCAGGAGGTGTCTGGGCTTGCAACATCTGGATCAAATGTTAGACTGGCAGTGGGACAATATCCTGCCTCTGGCACTAAGTCATCTGATCAAGCGGCTAAGGATTCTAAGTCAGCGGATACTTCTGGGAATGGTGTTGCTTCTGATATAGCCTTTGGAGGGGATATGTTCTCTGCAAGCTCGTTTCAGCCCAAGAAAGATTCTTCTACACTAGGATTTTCTTCTGGAAGGAACCAGCAGTCTATTAGGACTAGCTTGACTGAATCTTTGCAGAGCCCAATTGCATCCCAGCCTGTTGGTGCACAGCTTCCACAGGTCCAACCAGTGGGGAAACAGAATCAGCATGCCTTGGTCCAAACACATAATATGCCAAATCCACCTGGACATCCAGTGAGGTTGCAGGATTCTGCTTCTAGTCAGCCTCAATCTCCATGGCCAAGGATGACTTCAACTGATATTCAGAAGTATACAAAAGTATTTGTTGCAGTAGATACAGATAGGGATGGGAAAATCACTGGGGAACAAGCCCGGAACTTGTTCCTTAGCTGGAGATTACCACGGGAGGTTTTAAAGCAGGTTTGGGACTTATCTGATCAAGATAATGATAGCATGCTTTCTCTCAGGGAGTTTTGTATTGCACTGTACCTAATGGAACAACACAGGGAAGGACGTGCTCTTCCAGGAGTACTTCCAAGTAACATTCTCCTTGCTTTACCACCTTCTGGCCTACCTGCCACTCAGTACAGTTCTGTAACTTGGGGAAATCCATCAGGTTTTCAACAAGAGGAAGGGATGAGTGACCCTGGTGCTCAACGAGTGAACCCAACTACAGGCCGGCCACCAAGGCCAGCTTCTGTTTTTCTGTCTGATGAAGGACTTCAAAAACAGCAAAAGTCCCAAGTTCCAGTGTTGGAGAAGCACGTCATTAATCAGTTGAGTTCAGATGAGCAAAATTCAATTAATTCAAAGTTTCAAGAAGCATCAGAAGCTGATAAGAAGGTGGAAGCACTTGAGAAAGAAATTGTGGAGTCCAGAGAGAAAATAGAATTCTGCCATGCAAAAATGCAGGAACTTGTTCTGTACAAGAGCAGATGTGACAATCGTCTTAATGAGATCATAGAAAGGACATCAGCTGACAAGCGTGAGGTTGAGATCCTCACAAAAAAGTACGATGATAAATATAAACAAGTTGGAGATGTATCATCCAAGTTAACTACTGAGGAAGCCACATTTCGTGACATACAGGAGAAAAAAATTGAAGTGTATCAAGCAATTGCCAAGATGGAACAAGATGGAAATGTAGATGATTCTTTACTGGCTCATGCTGATTGTATCCAATCAGACCTTGATGAACTGGTAAAATCTCTAAACAACCGGTGTAAGAAGTATGGATTACGTGCAAAGCCAACAACACTTGTGGAACTACCCTTTGGCTGGCAGCCTGGTATCCAAGAAGGAGCTGCTGACTGGGATGAAGATTGGGATAAGCTTGAAGATAAAGAATTCGCCTTTGTCAAAGAACTCACACTTGATGTGCAAAACATCATCGCACCTCTGAAACAAAAATTGCCATTGGCTTCGAAACAGAAAGATTCAGAAATTGATAGTTCCAGAATTGCAGCTTCACCTAAGAGTGATAAAAAGTCTGAAAATCCCCAGAACACAGATGAGCAAGAAGTTGGCAATATTCATAATAAAAGTGAAGATGGGTCTGCAAAAAGTGTTCCTAACAGTCCATTTTCTAGGAGTTCTATTGGAAGTCCCCAGAGAGACTTTGCTGACTCTGGCATGGGGATGATTGCTGCTGGCGAAGATCGTTCACCCCGTGATCAAGATATCATACAAGGAACCCAAAGTGATCATAGTGGAGTCAAGTCTGTCTTTTCTGGTGAGAAAATTTTTGACGAACCAAATTGGGGAACCTTTGACGCTAATGATGATATTGACTCAGTTTGGGGATTCAATGCCAGTAGCACCACAAACGAGGAGAGAGATCTTAAGGGAGCTGGAGATGACTATTTCTTTGGTTCTGGGGATCTGGGCCTTGGCTCGATTAAAACAGGTTCACCACAGGGTGGTGATCCCTTCCTGAAGAGTGGCGGATTCAGTTTTGATGATTCTGTTCCAAACACACCACTTTTCAGCTCCAGCAGCTCTCCACAAAGGCCCAAAGAGTGGTTGGACAGTTCTTTTGACAACTTCTCTAGATTTGATTCTTTCCGTTCAGAGGATAGTGGCACTTTATCTACTCGGGAGACACCAACGCGGTTTGATTCAGTCCGCAGAGATATGGACTTTGATCATCTTCAAGGCTTTCCGGCATTTGATGACTCAGATCCCTTTGGCTCTGGGCCATTTAGGACTTCATCAGAAAACGAAGCTCACAGAAGAGGGTACCTTTGTCCACTTGAAGAGGATTGTGGTCCCGATGACTATCGGATTGTTGTCTGCATTGTGGATGAAAAGCATAGAATCCGACGTCCAATCGTCCATGGCAGTCACATAGACGGAGCATCCAGCAGTGAGAGTGAAGTCGTCAAAATCGGTGCCATCTTCACATTGAAAACCATAAACGGGAGAGTTTCCAAAATTGCGATCCAAGCTGCTGAGAGGGACGTCAATGCAGATCCTCGCATCCTGGGTGGACGTAAATTGTCTATCACCGTCCATGACTCCAACTTCAGTGGCTTTCTTAGCTTCATTGGGGCCCTCAAGTTGTTGGTGACGGACACTGTAGCAATAATTGGTCCGCAAAATTCGGGGATGGCCCATGTGCTTTCGCATCTTGCAAATGAGCTCCACGTCCCTCTACTCTCCTTTACGGCTCTTGATCCCACTCTGTCGCCTCTTCAGTACCCTTATTTCGTTCAAACTGCACCCAGCGATCAGTTCCAGATGACTGCGGTGGCAGACATGATTAGCTATTATGGTTGGAGAGAGGTCATTGCGGTGTTCAGCGACGATGATCAGAGCCGAAATGGCATAACTGTGTTGGGGGATAAGCTTGCAGAGAAACGCTGTAAGTTGTCTTATAAAGCAGCACTGCCCCCTGATCCAACAGCCAGCGCAAGCGATGTATCCTCTGAGCTGGCCAAGATTCAAAGCATGGAAGCTCGAGTGGTTGTAGTGCACACCTTTGCCCAAACAGGTCTCTTGGTTTTTGATGTGGCTCAAAGACTAGGGATGATGAGGCAAGGCTATGTTTGGATAGCTACTACTTGGCTTTCAACTGTCTTAGATTCAACTTCAAACACCTCCAACTCTCTGGATATCCGGGGAGTTCTCACGCTTCGCCCTCACACCCCTTTGTCAAGACCAAAACAGGCATTCATCTCAAGGTGGAAGCACATTAGTAATGGCTCTGTTGGGTTAAACCCATACGGACTCTACGCTTATGATGCTGTTTGGACCATTGCCCACGCATTGAAGCTATTCTTTGCTGATAATGGGACCATCTCTTTCTCCAATAATACAAATTTTGGTGGTATGGCTGGTCTTGCTTCCTTGAGCATCTTTGATGGTGGGAACCAGTTACTGGATAACATACTTCGCATAAACACGACTGGATTGACAGGGCCGATTCAATTTGTTGGCTCAAACAGATCCCCCCTGCATCCATCCTATGACATCCTTAATGTACATGCCACTGGCTACAGGACTATTGGATACTGGTCCAATTACTCTGGCCTCTCTGTCACAACTCCCGAGAAACTTCACAGAAAGACATCCATCCGCTCTGTTTCAAACCAGCATCTATACAATGTGACGTGGCCTGGAAATACAAGGGAAAGGCCTCGTGGATGGGTTTTCCCCCATAGTGGGAGGCAACTCAGAATCGGGGTCCCCAACAGAGCCAGTTATCAAGGCATCGTCTCACAAATAAATGGCACCCATGTAGTTCAAGGATACTGCATAGACATATTCCTCGCTGCCATCAAATTGCTTCCATATCCAATTCAATATAGGTTCATTCTGTTTGGAGAAGGACATAAGAATCCAAGCTACTATGATCTTGTCAACATGATTGCTTCGGATGTGTTTGATGCTGCTATAGGTGACATTGCAATTGTCACTGACCGAACAAAGATCGTGGATTTTACTCAACCATATATAGAGTCAGGTCTAGTTGTGGTTGCTCCGGTTCAAAGATTGAAGTCAAGTTCTTGGGCTTTCTTGAGACCATTTACTGCACCCATGTGGGGTGTCACTGCACTTTTTTTCCTTCTTGTTGGAGCAGTGATCTGGATTCTTGAACACCGGACCAACGATGAGTTCCGAGGGCCTCCAAAGACGCAAATAGTCACTGTTCTTTGGTTTAGTTTCTCAACTATGTTCTTTGCGCACAGAGAGAACACAGTTAGCCCACTTGGTCGTGTTGTGCTGATAATATGGCTTTTTGTGGTTCTAATAATCAATTCAAGTTACACGGCAAGCTTGACGTCAATTCTAACTGTGCAGCAGCTGTCCTCACCCATAACGGGCATTGACACCTTGATAACAAGCAACAAGCCCATAGGATTCCAGGTAGGGTCATTTGCTGAGAATTATCTCACTCAGGAACTCAACATCCCAAAACATAGGCTTGTTCCCCTTGGCTCGCCAGAAGAATATGCTTCTGCCCTTGAGAAGGGAACTGTTGCCGCTGTGGTAGATGAACGCCCATATGTTGAACTCTTCCTGTCAGAACACTGCCAATTCTCAATTAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCGGAGGGACTCTCCTTTAGCCATTGACATGTCAACTGCCATTCTGAGTCTATCCGAGAACGGTGAACTTAGCAAGATCCATGATAAGTGGCTTTCAAAGAAGGCCTGTGGTTTTCGCGGTGCACAGGATGAGCAGCTTCAATTCAACAGTTTCCGGGGCCTATTCCTGATCTGCGGGATAGCGTGTTTGGCGGCGCTCCTTATCTACTTGCCCTCGGTGGCATACCAATTCAGTCAGAACTCCCCGGAAAGAGAGAGAGGCAATCATCCTTTTGGTCATTCCAGCACCTCACGTTCTGCACGCATACAGACATTTCTAAGCTTCGTTGATGAAAAGGAAGACACATCACGCAACAGCAGCAGCAGCGGCAAGTTAAAAAGGAAACTTGAGGATATCTCATCTTCCAGATCCAGAACCAGAATCAGCCGTTTAAGGACCATGGCCATGCCCAAGAAATTACACATACACATAGGCACTTCTCAACAGTCAGGACCAAATGCCGGCTACTCAGGTTCCACCGATCAAGCAATCAAGTAG 6024 0.4592 MASRASNVDLFDAYFRHADLDHDGRISGTEAVSFFQGSGLPKQVLAQIWAFANQSQSGFLGRAEFYNALKLVTVAQSKRELTPEIVKAALYGPATSKIPAPQINFSATVAPQLNSSAPTPSPMPTTTATPASAPASTSASASASQSNINSMPHQNVGLRGPLPSLSGNQQNLPYPGSPLVKPTQNIPDSASNLAPGIANQGIRGVMAGGGPHAETHGIQSDGSTPQMVGVPAVTSSLIAPRGSSPTSTQEVSGLATSGSNVRLAVGQYPASGTKSSDQAAKDSKSADTSGNGVASDIAFGGDMFSASSFQPKKDSSTLGFSSGRNQQSIRTSLTESLQSPIASQPVGAQLPQVQPVGKQNQHALVQTHNMPNPPGHPVRLQDSASSQPQSPWPRMTSTDIQKYTKVFVAVDTDRDGKITGEQARNLFLSWRLPREVLKQVWDLSDQDNDSMLSLREFCIALYLMEQHREGRALPGVLPSNILLALPPSGLPATQYSSVTWGNPSGFQQEEGMSDPGAQRVNPTTGRPPRPASVFLSDEGLQKQQKSQVPVLEKHVINQLSSDEQNSINSKFQEASEADKKVEALEKEIVESREKIEFCHAKMQELVLYKSRCDNRLNEIIERTSADKREVEILTKKYDDKYKQVGDVSSKLTTEEATFRDIQEKKIEVYQAIAKMEQDGNVDDSLLAHADCIQSDLDELVKSLNNRCKKYGLRAKPTTLVELPFGWQPGIQEGAADWDEDWDKLEDKEFAFVKELTLDVQNIIAPLKQKLPLASKQKDSEIDSSRIAASPKSDKKSENPQNTDEQEVGNIHNKSEDGSAKSVPNSPFSRSSIGSPQRDFADSGMGMIAAGEDRSPRDQDIIQGTQSDHSGVKSVFSGEKIFDEPNWGTFDANDDIDSVWGFNASSTTNEERDLKGAGDDYFFGSGDLGLGSIKTGSPQGGDPFLKSGGFSFDDSVPNTPLFSSSSSPQRPKEWLDSSFDNFSRFDSFRSEDSGTLSTRETPTRFDSVRRDMDFDHLQGFPAFDDSDPFGSGPFRTSSENEAHRRGYLCPLEEDCGPDDYRIVVCIVDEKHRIRRPIVHGSHIDGASSSESEVVKIGAIFTLKTINGRVSKIAIQAAERDVNADPRILGGRKLSITVHDSNFSGFLSFIGALKLLVTDTVAIIGPQNSGMAHVLSHLANELHVPLLSFTALDPTLSPLQYPYFVQTAPSDQFQMTAVADMISYYGWREVIAVFSDDDQSRNGITVLGDKLAEKRCKLSYKAALPPDPTASASDVSSELAKIQSMEARVVVVHTFAQTGLLVFDVAQRLGMMRQGYVWIATTWLSTVLDSTSNTSNSLDIRGVLTLRPHTPLSRPKQAFISRWKHISNGSVGLNPYGLYAYDAVWTIAHALKLFFADNGTISFSNNTNFGGMAGLASLSIFDGGNQLLDNILRINTTGLTGPIQFVGSNRSPLHPSYDILNVHATGYRTIGYWSNYSGLSVTTPEKLHRKTSIRSVSNQHLYNVTWPGNTRERPRGWVFPHSGRQLRIGVPNRASYQGIVSQINGTHVVQGYCIDIFLAAIKLLPYPIQYRFILFGEGHKNPSYYDLVNMIASDVFDAAIGDIAIVTDRTKIVDFTQPYIESGLVVVAPVQRLKSSSWAFLRPFTAPMWGVTALFFLLVGAVIWILEHRTNDEFRGPPKTQIVTVLWFSFSTMFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDTLITSNKPIGFQVGSFAENYLTQELNIPKHRLVPLGSPEEYASALEKGTVAAVVDERPYVELFLSEHCQFSIRGQEFTKSGWGFAFRRDSPLAIDMSTAILSLSENGELSKIHDKWLSKKACGFRGAQDEQLQFNSFRGLFLICGIACLAALLIYLPSVAYQFSQNSPERERGNHPFGHSSTSRSARIQTFLSFVDEKEDTSRNSSSSGKLKRKLEDISSSRSRTRISRLRTMAMPKKLHIHIGTSQQSGPNAGYSGSTDQAIK 2007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05028 2007 MobiDBLite consensus disorder prediction 113 228 - -
Aip03g05028 2007 Gene3D - 1111 1452 - -
Aip03g05028 2007 ProSiteProfiles EH domain profile. 7 97 IPR000261 GO:0005515
Aip03g05028 2007 MobiDBLite consensus disorder prediction 113 154 - -
Aip03g05028 2007 Gene3D - 1826 1859 - -
Aip03g05028 2007 Pfam Cytoskeletal-regulatory complex EF hand 393 464 IPR000261 GO:0005515
Aip03g05028 2007 Gene3D - 1635 1764 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 269 292 - -
Aip03g05028 2007 Coils Coil 567 601 - -
Aip03g05028 2007 SMART efh_1 44 72 IPR002048 GO:0005509
Aip03g05028 2007 SMART efh_1 402 430 IPR002048 GO:0005509
Aip03g05028 2007 SMART efh_1 436 464 IPR002048 GO:0005509
Aip03g05028 2007 SMART efh_1 10 38 IPR002048 GO:0005509
Aip03g05028 2007 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Aip03g05028 2007 MobiDBLite consensus disorder prediction 379 396 - -
Aip03g05028 2007 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1085 1976 - -
Aip03g05028 2007 Gene3D - 1208 1477 - -
Aip03g05028 2007 SMART AABind_6 1523 1863 IPR001638 -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 161 196 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 503 533 - -
Aip03g05028 2007 Pfam EF hand 12 30 IPR002048 GO:0005509
Aip03g05028 2007 CDD EH 11 77 IPR000261 GO:0005515
Aip03g05028 2007 SUPERFAMILY Periplasmic binding protein-like II 1502 1862 - -
Aip03g05028 2007 PANTHER GLUTAMATE RECEPTOR 3.6 1085 1976 - -
Aip03g05028 2007 Gene3D - 380 484 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 1985 2007 - -
Aip03g05028 2007 Gene3D - 1519 1634 - -
Aip03g05028 2007 Pfam Receptor family ligand binding region 1111 1461 IPR001828 -
Aip03g05028 2007 SMART eh_3 2 95 IPR000261 GO:0005515
Aip03g05028 2007 SMART eh_3 391 490 IPR000261 GO:0005515
Aip03g05028 2007 MobiDBLite consensus disorder prediction 1940 1967 - -
Aip03g05028 2007 Gene3D - 1785 1825 - -
Aip03g05028 2007 ProSiteProfiles EF-hand calcium-binding domain profile. 6 41 IPR002048 GO:0005509
Aip03g05028 2007 CDD PBP1_GABAb_receptor_plant 1094 1479 IPR044440 -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 309 340 - -
Aip03g05028 2007 CDD EH 403 469 IPR000261 GO:0005515
Aip03g05028 2007 CDD GluR_Plant 1522 1860 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 1940 2007 - -
Aip03g05028 2007 SUPERFAMILY EF-hand 388 481 IPR011992 -
Aip03g05028 2007 ProSiteProfiles EH domain profile. 399 482 IPR000261 GO:0005515
Aip03g05028 2007 SMART GluR_14 1525 1862 IPR001320 GO:0015276|GO:0016020
Aip03g05028 2007 MobiDBLite consensus disorder prediction 814 837 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 771 873 - -
Aip03g05028 2007 Pfam Ligand-gated ion channel 1862 1891 IPR001320 GO:0015276|GO:0016020
Aip03g05028 2007 Gene3D - 3 97 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 236 255 - -
Aip03g05028 2007 SUPERFAMILY Periplasmic binding protein-like I 1088 1516 IPR028082 -
Aip03g05028 2007 Pfam Bacterial extracellular solute-binding proteins, family 3 1545 1861 IPR001638 -
Aip03g05028 2007 SUPERFAMILY EF-hand 7 86 IPR011992 -
Aip03g05028 2007 SUPERFAMILY Voltage-gated potassium channels 1647 1731 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 366 396 - -
Aip03g05028 2007 MobiDBLite consensus disorder prediction 773 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05028 Aip-Chr3 134873637 134888647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g05028 1083 1972 Ion Channels AT2G17260 61.130 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05028 K05387 K12472 gsj:114385464 1358.97