Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05027 ATGGGAACTTGCTGGGGTTCTCCAAAATTACCACCCCATAACTCCAACCCAACTACCACCACCACCACCACCACCGGTAACCTCAGCGGAGGTACGGCATCAACGTCAACGTCAACGTCAACGTCAACGTTAACGTTAACCTCAACGGGGACATCCCGCGTCACGAGCAGCAGCTGCAGCTACACGACTTCGTCGGGAAGTGGGAACATCAGCTCCGTAAGCAAGTTCTCCGATGATCATTATCCCGACGGCCAGATCCTACCTGCCGCAAATCTCAGGATCTTCACCTTCGCAGAGTTGAAGGCTGCCACTAGGAATTTCAGACTTGACACCGTGCTTGGCGAGGGAGGTTTCGGCAAGGTCTACAAGGGGTGGCTCGAAGACAAGCCATCCTCCAAGAATGCAAATGGAACCGTCATTGCCGTCAAAAAATTGAACTCCGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAAGCAGAACTTCTTCTCATCTATGAATTTATGCAGAAAGGCAGTTTGGAAAACCACCTATTCGGAAGGGGCTCTGCTGTTCAACCACTTCCATGGGATATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGCCTGGCCTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCGCTCCCATGTGACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTAGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGATAGAAGAAAGCTGAAAAGCATTATGGATTTTCGGTTGGAAGGAAAATATCCATCCAAAGTTGCATTTCGTATAGCTCAGCTTGCGCTGAGATGTCTTGAAACTGAGCCCAAACAGCGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGATTTCATGCTGCCAATGAGAAACCTATGGAGCCAAAATCTGGTTCTAATCATACTCATAGCCGTCGAGGGTCGGTGGTCAGACTGTCAGAGGCCATTGGCCAATCGATGTTAGGCTGTGTCATGGGTCTATTCATTGAAGGATTTGCCACTTGTTTCATTTTTCTATTTCCTGCTCTCTAG 1344 0.4814 MGTCWGSPKLPPHNSNPTTTTTTTTGNLSGGTASTSTSTSTSTLTLTSTGTSRVTSSSCSYTTSSGSGNISSVSKFSDDHYPDGQILPAANLRIFTFAELKAATRNFRLDTVLGEGGFGKVYKGWLEDKPSSKNANGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDFRLEGKYPSKVAFRIAQLALRCLETEPKQRPSMKEVLESLERFHAANEKPMEPKSGSNHTHSRRGSVVRLSEAIGQSMLGCVMGLFIEGFATCFIFLFPAL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05027 447 Gene3D Transferase(Phosphotransferase) domain 1 191 411 - -
Aip03g05027 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Aip03g05027 447 MobiDBLite consensus disorder prediction 9 69 - -
Aip03g05027 447 SUPERFAMILY Protein kinase-like (PK-like) 84 386 IPR011009 -
Aip03g05027 447 CDD STKc_IRAK 113 389 - -
Aip03g05027 447 PANTHER OS01G0588500 PROTEIN-RELATED 39 398 - -
Aip03g05027 447 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 39 398 - -
Aip03g05027 447 Pfam Protein tyrosine and serine/threonine kinase 109 386 IPR001245 GO:0004672|GO:0006468
Aip03g05027 447 ProSitePatterns Protein kinases ATP-binding region signature. 113 144 IPR017441 GO:0005524
Aip03g05027 447 Gene3D Phosphorylase Kinase; domain 1 91 190 - -
Aip03g05027 447 MobiDBLite consensus disorder prediction 1 69 - -
Aip03g05027 447 ProSiteProfiles Protein kinase domain profile. 107 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05027 Aip-Chr3 134861814 134863851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g05027 84 387 Receptor kinase-like Gene Family AT4G02010 50.649 2.09e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip03g05027 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05027 - - gmx:100305417 605.134