Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05024 ATGAACAACATCGTCGACAACTCCTCCTGGGCTCATTCTGGTTCTCCCAACACAGATCGTGCATGCGTGGTTACGGATGGTGTTGATGTTGCGGCTTCGTCTTCTTCGTCGTGTGATCATCTTATTCGGAGGCGCAACCCTAGAAAGAAGATCACAAAATTGATGAGGGTAATGGAGGAAGGGGTGAAGGTCAAGGGGAAGGGTGGTTGCAAGAAGCCTGATCCTGAGGCCCCAAAGATCACCCGTCCCTGCACCGAGTGCGGCAAGAGATTCTGGTCCTGGAAGGCTCTCTTCGGCCACATGCGCTGCCACCCAGAGCGCCACTGGCGAGGGATCAATCCTCCCCGCACCCTCATCAGACCACCACCGCAAGAAGACGTGGGCGTCACCTTCACCCCGGAGGACCACGAGGTTGCGGCGTGTCTACTGTTGCTGGCGAGTGGGAAGGGGAAGGAGAGGGCCAATGATGACTACGACAACATAGTAGTGGACAACGTGGTGGACGAGGAGGAACAAGAACAAGAACAGGAGCGGTTCGAGTGCTCCAGTTTCAACAACGCACTTGGAGGAGGCCATAACTGTAGCATAACTGCACCCTCCCCCACCCCCGTTGACCTCCATCAACAACACCACCATTGCTCTTTGGATTTGAGGTTGGGTCTTAATTAG 669 0.5516 MNNIVDNSSWAHSGSPNTDRACVVTDGVDVAASSSSSCDHLIRRRNPRKKITKLMRVMEEGVKVKGKGGCKKPDPEAPKITRPCTECGKRFWSWKALFGHMRCHPERHWRGINPPRTLIRPPPQEDVGVTFTPEDHEVAACLLLLASGKGKERANDDYDNIVVDNVVDEEEQEQEQERFECSSFNNALGGGHNCSITAPSPTPVDLHQQHHHCSLDLRLGLN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05024 222 SUPERFAMILY beta-beta-alpha zinc fingers 83 107 IPR036236 -
Aip03g05024 222 Pfam C2H2-type zinc finger 83 106 - -
Aip03g05024 222 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Aip03g05024 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Aip03g05024 222 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 30 189 - -
Aip03g05024 222 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 30 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05024 Aip-Chr3 134810839 134811507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g05024 35 195 C2H2 Transcription Factor Family AT4G35280 41.243 2.75e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05024 - - adu:107496069 399.823