Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g05006 ATGATCCCTTTCTCCTTGCAGAAGAACTGGGGGAATGGCCGAATGGGGGTTACTGGTCGGGCGCCTTCGTTGCGCTCTTCGTCGCTGGTGGCAGAAGCAGCAGGTCTTGGGGCTCGTCGTCTTCTTGCTTTGAGTCTCGCCGTCAGCCTCCTTCGCACAATCAGAGAACGCAGAGAAGACAGAAGAGAACTCGAACGCAGCTTGGAGGAAGCACCGAAGCAGCCATCTCTCGTCGCCGTTCCTCAACGTCCAGCCACCGTCGCCGGCCTCGCCTTCTGCCTCCGTCGCGCAGCCACTGTCTTGACGGTGCCAGTTCTGTTCCATCGCGTCAGCCCTTCGGTCGTGCCCTGTTCCTTTCTTGCTACTGATCTGCTCTGCTCTGTTCTGGCATTTAGTTCTAGAGGTCAAGTTGTTGTTGCAGCCTCTTTAACGAAAGATCAATTAGGCAAATCAGTTCATTTGGCTTACTTGGAGATAAGCATAACACATGATGGTGTTGGTGTTCCGGAAACATTGCTGAACCAAATGTTCGGACGAGACGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTCATGAATGGAGACGTGCGGTATCTGAGAGAAGCTGGCTAA 636 0.533 MIPFSLQKNWGNGRMGVTGRAPSLRSSSLVAEAAGLGARRLLALSLAVSLLRTIRERREDRRELERSLEEAPKQPSLVAVPQRPATVAGLAFCLRRAATVLTVPVLFHRVSPSVVPCSFLATDLLCSVLAFSSRGQVVVAASLTKDQLGKSVHLAYLEISITHDGVGVPETLLNQMFGRDGQESEEGISLLISRKLLKLMNGDVRYLREAG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g05006 211 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 150 206 IPR003594 -
Aip03g05006 211 ProSiteProfiles Histidine kinase domain profile. 120 211 IPR005467 -
Aip03g05006 211 PANTHER PHYTOCHROME 119 211 - -
Aip03g05006 211 Gene3D - 49 211 IPR036890 -
Aip03g05006 211 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 121 209 IPR036890 -
Aip03g05006 211 PANTHER TWO-COMPONENT HISTIDINE KINASE 119 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g05006 Aip-Chr3 134692197 134696601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g05006 120 211 Histidine Kinase Gene Family AT1G09570 64.130 7.28e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g05006 K12120 - adu:107487633 146.362