Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04961 ATGGGTTGGCCCTTGTTGGGTTCTCTACCTCAAATGGGTTCCCTGGCACACGCAAAACTCGCTTCCATGGCTACAAACTTGAAGGCGAAGAGGCTCATGGCGTTGAGTCTTGGCTCCACACCGGTTATCATAAGCAGTCATCCTGAAACCGCAAGGGAGATTCTCTTCGGTTCTTCATTCTCCGATCGACCAATCAAAACTTCTGCAAAAACCCTAATGTTCGAGCGCGCCATTGGTTTCGCCCCTTCCGGAACCTACTGGCGCCACCTCAGAAGAATCGCCGCTTTCCACATGTTCTCTCCTAAAAATATTCAGAGCTTGGAGAATCTGCGGCATCGCCTGGCTTCTGAGATGGCGGTGAAAGCAATGGGGATGATGGAGGAGAAAGGGTTTGTGGAAGTTCGTAGTGTGTTTCAGGAAGGCTCTCTTAGCAACATTCTGGAGAGTGTGTTTGGTTCTTCTTCGTTGATTAGTGAGGAGTTGGGAGATATGGTGAAAGAAGGGTATGAATTAATCCATATGTTTAACTTGGAAGATTATTTTCCATTGTTGAAGTTTGTGGACTTTTATGGTGTGAAGAGAAGGTGTCACAGATTGGCCAGTAAGGTTAAAAGTGTGGTTGGTAACATTGTGGATCAAAGAAAAAAGTGTCCCCAATCGTTGCTTCGGAACAATCACGATTTTCTTAGCACTTTGCTTTCACTTCCTAACAAGGAAGAAAGCTTAGCTGATTCGGATATGGTCGCTATTCTTTGGGAAATGATATTTAGAGGAACAGACACAGTGGCCATATTACTGGAATGGATCATGGCAAGGATGGTACTTCACCAGGACATACAAATGAAAGCCCGCCAAGAGATTGACACGTGTGTTGGCCAAAATGGTCACGTGCAAGACTCCGACATTCCCAACCTCCCTTACCTTCAGGCCATAGTCAAAGAGGTACTCCGCTTGCACCCGCCGGGCCCATTGCTATCATGGGCCCGCCTAGCTGTTCATGATGTCCACGTGGACAAAGTCTTTGTGCCAGCTGGCACAACCGCAATGGTTAACATGTGGGCTATATCGCATGACTCTTCTATATGGGAAGAGCCTTGGGCTTTTAAGCCCGAACGATTCATGAAGGAAGATATATCCATTATGGGCTCAGACTTGAGGCTAGCACCGTTTGGTGCAGGGCGTAGGGTGTGCCCGGGGAGAGCGTTGGGCTTAGCCACTGTCCATATCTGGCTTGCACGGCTTCTCCACCATTTCGTGTGGCTTCCCACGGCACAACCCGTGGATCTTTCCGAAAATCTCAGGCTTTCTCTCGAGATGAAGACACCTTTGCGTTGCCGACTGGTTCCTAGACATAACTACGTAAGCCCTTAA 1371 0.4821 MGWPLLGSLPQMGSLAHAKLASMATNLKAKRLMALSLGSTPVIISSHPETAREILFGSSFSDRPIKTSAKTLMFERAIGFAPSGTYWRHLRRIAAFHMFSPKNIQSLENLRHRLASEMAVKAMGMMEEKGFVEVRSVFQEGSLSNILESVFGSSSLISEELGDMVKEGYELIHMFNLEDYFPLLKFVDFYGVKRRCHRLASKVKSVVGNIVDQRKKCPQSLLRNNHDFLSTLLSLPNKEESLADSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQMKARQEIDTCVGQNGHVQDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAISHDSSIWEEPWAFKPERFMKEDISIMGSDLRLAPFGAGRRVCPGRALGLATVHIWLARLLHHFVWLPTAQPVDLSENLRLSLEMKTPLRCRLVPRHNYVSP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04961 456 PANTHER CYTOCHROME P450 78A7-RELATED 1 451 - -
Aip03g04961 456 Gene3D Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 309 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 351 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 246 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 266 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS E-class P450 group I signature 26 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Aip03g04961 456 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 1 451 - -
Aip03g04961 456 SUPERFAMILY Cytochrome P450 2 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS P450 superfamily signature 310 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 PRINTS P450 superfamily signature 257 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g04961 456 Pfam Cytochrome P450 3 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04961 Aip-Chr3 134223414 134225562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04961 13 451 Cytochrome P450 AT1G13710 55.011 9.55e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04961 - - gmx:100817944 718.768