Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04935 ATGGCCATTGTGGATACTCTGCTTGTAACAGCCAATGTGGCATTCTTCTATGCAATTCTGATATGGCTGCTTCTTCACACTTTGAGACAAAGCAAGCTTCGACGTGCTGTGTTTCTCCAACAAGGACCAAAGTTCTTCTCCATTATCACTCTCCTATTCAATTTTATTCTTACCCTTTTAACTATAGCTTTTGCAGTTCATGAATATAGGACTAATAAAATAGTGAGATATAGTTCTGTTACATTTGCTCTAACATGGGTTATGGCAAGCTTGGTTTCATTCTATTCAATGAAGAAGACAACAAGAGACAACAAAAGATTCCCTTTTGTTCTGGTTCTCTGGTGGGTCTGGGCCAGTATCATAGAAGCAATCTCAGTTTCTATTGGACTAATGAAGAACAACTTTGAATACTTGGACTTCTGGAATTTCTTGTCTGAGGATGATAACATAGTTGGTGTGGTTTCCTTGCCTATGTTGTTGTTGCTTTTGTGTTTGAATTTATGTGCAAGAGAAGAACAACACAACACTGACATGGAACAGCTCTTGGTTCACCCTGGAGAAGAAGAAGATGATGATGAAGATGGAGAGAACTTCACAAATGCAGGCATTTGGAGCCAACTCACATTTCGATGGCTGAATCCCATTTTTAGAAAGGGTCGAGTTCAGAAGCTTGAGCTTGCTCACATTCCTGATGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTATTGGAAGAATCGCTTCGCAAACAGAAACTTGAAGGGGCTTCCTTGACTAAAGCTATAACCAGTTCTGTGTGGAAGTCCTTGGCTTTAAATGCAGTTTTTGCCGGGGTTAATACAATTGCATCTTATATGGGTCCATTGTTGATTACATACTTTGTCAATTTCTTGGTGGATGATAATTCCAATTCAAGCATCCAATGTGGCCTCATTCTTGCATTCATATTCTTCCTCTCAAAGACATTGGAGTCACTGAGCCAAAGACAATGGTACTTTGGTGCTCAGAGAATTGGAATTCGAGTGCGCGCGGCTCTTATGACTCTAATTTACAGCAAGTCCTTAATGATCAAGTGTGCAGGGCCAACCCATGGAAAAATCATAAACTTGGTGAATATGGATGTTGAAAGAATTGGGGATTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCCGTTCAGGTTATTTTGGCCTTAGTGATATTGTACATAAACTTGGGATTCTTGCCTTCAATTTCTGCACTTGCTGTCACCATTTTGGTTATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAAATTACACTCCAAGATCATGGAAGCTAAGGATACAAGAATCAAGATGACTTCAGAGATAATGAAGAACATGAGGATACTGAAATTGCATTCATGGGAATCAACATTCTTACAGAAACTTCTCCAATTGAGAGACACTGAGAAGAGTTGGCTGCAGAAGTACCTCTACACTTGCTCAGCAGTAGCCACTCTTTTCTGGACTTCTCCAACTTTGGTTTCTGTTGTTACTTTCGGCATATGCATACTGGTGAACACAGAACTGACTGCGGCTACTGTCCTCTCAGCCTTGGCAACTTTTCGGATTCTGCAGGAACCAATCTACAATCTTCCAGAGCTGATTTCTATGATAGCTCAAACAAAAGTCTCTCTTGATCGAATCCAAGAGTTGATCAATGAAGAGGACCAGAACCAGTTTATGAACAAGCACACTTCGAAAGATTCATCAATTGTTATTGAAATCAAGCCAAGTGAATATGCATGGGAAACAAGTGATGGAACCAACAAGAAACCAACAATTCAAATCACAGAAAACTTGAAGATAAAGAAAGGTCAGAAGGTAGCAGTTTGTGGTTCAGTGGGGTCTGGAAAATCAAGCTTACTTTGTTGTATGCTTGGTGAGATTCCATTGGTTTCCGGGACATTGATCAAAGTCTATGGAACAAGAAGTTATGTGCCACAGAGTCCCTGGATTCAATCAGGAACAATAAGAGAAAATATCCTGTTTGGAAAGGAAATGAACAAGGACTTCTATGAAAGTGTTTTGGATGGCTGTGCTTTGCATCAAGATATCAACATGTGGGGTGATGGAGATTTGAATCTTGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGCCAGAAACAACGGATTCAACTCGCAAGAGCTGTTTACAATGATTCAGATATTTACTTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACCGGAACTCATTTATTTAAAAAATGCCTTATGCAACTTTTGTCTGAGAAGACAGTTGTTTATGCTACTCATCAACTAGAATTTTTGGAAGCTGCAGATTTAATTCTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGAACTCATAGCATGTCCCAACTGTGAATTTGTTCGACAAATGGCTGCTCATGAAGAAACAATAAACCAAATAAATCCATGGCATGAAGAGAACTCAATTAGCTGCAGGCCCCTTCAAAAGAATCAAATTGAAGTTGCTGAAGAGAATCTTCAAGAAAGCATAAGCAATTGGAAGAGAAACAAAGAAGAAGAAGCGGAGACCGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCTGCATATAGAGGATCACTTGTTCCGGTCATTCTTCTCTGCCAGATTCTGTTTCAAGTGATGCAAATGGGAAGCAATTATTGGATTTCTTGGGCTGCAGAACAAACTGGGAGGGTAACCAAAAGGATGCTTATGGGAACATTTGTTCTTCTTTCTGGTGGAAGCTCTATCTTTATACTTGGAAGGACTGTTTTGATGGCAGTGGTGGCTGTTGAGACAGCTCAGCGTCTTTTTCATGGAATGATTACATCTGTTTTCAGAGCACCTGTTTCATTTTTTGATACCACACCTTCAAGCAGAATCCTCAGTAGGTCATCAACAGATCAAAGTACAATTGACACAGACATACCATACAGATTAGCAGGGCTAGTGTTTGCACTAATTCAGTTGTTGAGTATTATCATGCTAATGTCGCAGGTCGCGTGGCAAGTCATCCTTGTGTTTCTTGTGGTGTTTGCTATCTCCATATGGTATCAGGCTTATTACATTACTACTGCCAGGGAATTAGCCAGGATGGTAGGGATCAGAAAAGCCCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCCGCCACGATTCGTTGTTTCAATCAAGAACAAATATTCATGACCAAAATCAAGGATCTTGTTGATGAATACTCTAGAGTAGCCTTTCATAATTATGCCACCATGGAATGGTTGTCAGTCCGGATCAATTTTCTCTTCAATCTAGTCTTCTACTTTGTTCTCATCATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTACTTCAGGCTTGGGTCATATGGAACCTTTGCAATGTTGAGAACAAGATGATATCTGTTGAGAGAATATTGCAATTCTCTAGCATACCAAGTGAAGCACCACTGATAATCCAAGATTGTAGGCCTGAACCAGAGTGGCCTATGGAAGGGAAAATTGAGCTTCAGAATATTCATATTCGGTATGATCCGGCTGGTCCTATGGTTCTCAAAGGTGTCACTTGCACATTCCCGGGGCGAAAGAAGATCGGAGTAGTAGGGAGGACAGGGAGTGGAAAATCAACTCTGGTGCAAGCCCTTTTTCGAGTGGTGGAGCCTTTGGAAGGAAAGATACTAATAGATGGAGTACATATTTCCAAGATTGGTCTGCAGGATTTAAGATCTAAGCTTGGTATAATTCCTCAAGACCCAACCTTGTTTCTAGGTACTGTTAGGACTAACTTGGATCCTCTAGAACAACATGCGGATAAAGAACTCTGGGAGGTTCTCAAGAAGTGCCATCTTGCTGAAATTGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGCGTTGGACAAAGGCAACTCGTTTGTCTTGCTAGGCTGCTATTGAAAAAGAGAAGGATTTTGGTTCTAGATGAGGCAACAGCATCTATTGACACTGCAACTGACAATTTAATTCAAAAGACTATTAGAGAAGAAACTAGTGAATGCACAGTGATTACTGTAGCACATAGAATCCCTACAGTTATTGATAATGACTTGGTTTTGGTCCTTGATGAAGGGACAATTGCAGAGTATGATGAACCAGATCAGTTGCTGCAGAACAATACTTCATCTTTCTCAAAGTTGGTTTCAGAATTTTTGAGGAGATCATCCCCCAAGTAG 4335 0.4067 MAIVDTLLVTANVAFFYAILIWLLLHTLRQSKLRRAVFLQQGPKFFSIITLLFNFILTLLTIAFAVHEYRTNKIVRYSSVTFALTWVMASLVSFYSMKKTTRDNKRFPFVLVLWWVWASIIEAISVSIGLMKNNFEYLDFWNFLSEDDNIVGVVSLPMLLLLLCLNLCAREEQHNTDMEQLLVHPGEEEDDDEDGENFTNAGIWSQLTFRWLNPIFRKGRVQKLELAHIPDVPHSETAENASSLLEESLRKQKLEGASLTKAITSSVWKSLALNAVFAGVNTIASYMGPLLITYFVNFLVDDNSNSSIQCGLILAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMTLIYSKSLMIKCAGPTHGKIINLVNMDVERIGDFCWYIHGVWLLPVQVILALVILYINLGFLPSISALAVTILVMVCNTPLANMQEKLHSKIMEAKDTRIKMTSEIMKNMRILKLHSWESTFLQKLLQLRDTEKSWLQKYLYTCSAVATLFWTSPTLVSVVTFGICILVNTELTAATVLSALATFRILQEPIYNLPELISMIAQTKVSLDRIQELINEEDQNQFMNKHTSKDSSIVIEIKPSEYAWETSDGTNKKPTIQITENLKIKKGQKVAVCGSVGSGKSSLLCCMLGEIPLVSGTLIKVYGTRSYVPQSPWIQSGTIRENILFGKEMNKDFYESVLDGCALHQDINMWGDGDLNLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQLLSEKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKELIACPNCEFVRQMAAHEETINQINPWHEENSISCRPLQKNQIEVAEENLQESISNWKRNKEEEAETGRVKWSVYSTFVTSAYRGSLVPVILLCQILFQVMQMGSNYWISWAAEQTGRVTKRMLMGTFVLLSGGSSIFILGRTVLMAVVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTIDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILVFLVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQIFMTKIKDLVDEYSRVAFHNYATMEWLSVRINFLFNLVFYFVLIILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPMEGKIELQNIHIRYDPAGPMVLKGVTCTFPGRKKIGVVGRTGSGKSTLVQALFRVVEPLEGKILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADKELWEVLKKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGTIAEYDEPDQLLQNNTSSFSKLVSEFLRRSSPK 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04935 1444 PANTHER OS01G0902100 PROTEIN 108 1442 - -
Aip03g04935 1444 CDD ABC_6TM_ABCC_D2 886 1176 IPR044726 GO:0140359
Aip03g04935 1444 CDD ABC_6TM_ABCC_D1 273 560 IPR044746 GO:0140359
Aip03g04935 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1193 1427 IPR027417 -
Aip03g04935 1444 SUPERFAMILY ABC transporter transmembrane region 266 567 IPR036640 GO:0005524|GO:0016021
Aip03g04935 1444 SUPERFAMILY ABC transporter transmembrane region 888 1181 IPR036640 GO:0005524|GO:0016021
Aip03g04935 1444 ProSitePatterns ABC transporters family signature. 715 729 IPR017871 GO:0005524
Aip03g04935 1444 Coils Coil 838 865 - -
Aip03g04935 1444 Gene3D ABC transporter type 1, transmembrane domain 246 570 IPR036640 GO:0005524|GO:0016021
Aip03g04935 1444 Gene3D ABC transporter type 1, transmembrane domain 850 1182 IPR036640 GO:0005524|GO:0016021
Aip03g04935 1444 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 108 1442 - -
Aip03g04935 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1201 1435 IPR003439 GO:0005524
Aip03g04935 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g04935 1444 CDD ABCC_MRP_domain2 1199 1419 - -
Aip03g04935 1444 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 272 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g04935 1444 Pfam ABC transporter transmembrane region 890 1128 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g04935 1444 Pfam ABC transporter transmembrane region 273 539 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g04935 1444 SMART AAA_5 616 790 IPR003593 -
Aip03g04935 1444 SMART AAA_5 1227 1418 IPR003593 -
Aip03g04935 1444 Pfam ABC transporter 611 742 IPR003439 GO:0005524
Aip03g04935 1444 Pfam ABC transporter 1218 1366 IPR003439 GO:0005524
Aip03g04935 1444 Gene3D - 608 837 IPR027417 -
Aip03g04935 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 813 IPR003439 GO:0005524
Aip03g04935 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 803 IPR027417 -
Aip03g04935 1444 CDD ABCC_MRP_domain1 585 790 - -
Aip03g04935 1444 Gene3D - 1184 1437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04935 Aip-Chr3 133961658 133967720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04935 584 839 Calmodulin-binding Proteins AT2G36910 28.723 8.37e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04935 - - adu:107481980 2722.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04935 03 133961658 133967720 Aip03g04935 03 133961658 133967720 ECH