Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04928 ATGGAAATGGAGTTAATATACAAAGAAACCATGAAACCAAGTTCAGGCACTCCTCCACACCTCAAAACTTACCCTCTCTCCTTCTTGGATGTGACCACTCCTCCCCAATACATGCCGATGATTTACTTTTACCATCCAAAACAAATTGAAAACCAAGAATCCAAGTTAGCCCTCCTCAAGAAATCCTTACCCGAAGCTCTCTCAATGTACTACCCAATTGCAGGCAGGTTCAAAGGTAGACTCGCCATTGACTGCAACGACCAAGGAGTGCCATTGCTCGTCACAAAACTCAAATGCCATCTCTCTCACTTTCTCAACAACCCAATCCAGCCTAATCTGCTTCCTCTGTTTCCAGACAATTTGGCCTGGACAAATATGAACAATCCAGACCACGATCCCATCATGGCCATTCAAATCAACTGCTTCCATTGCGGAGGAATTGCAATTGCAGTCTGCGTCTCTCACAAGCTCGGCGACATTTCCACTCTCATCAACTTCGTCAACGACTGGGCCGCCATCACCAACCACTACCAACATCAGAACCACACACTACCCTCTCCGCCCTTACTGGACGCCGGAGTGTCCGTTTTTCCTCAAGGAGACCTGCCGGTTTACCAAGAAAAACCCTACTTCGGTCTCCCGAAATCGGTCTGCAAGAGGTTCGTGTTCGAAGCTTCGAAGATCGAAGCCCTTAAAGCCACGGCTGCACCGATTCATCCGACAAGGTTTGAAGCGGTGGCAGCACTGATTTGCAAGTGTGCGGCTTCTGCACTGGGGTTAAGCCCTAACTCGCCGTTGTTAAGCACCGTTACGGTGAATCTCCGCAAGAGGATCGATCCTCCTGTCCCCAGCAAAACCTTAGGGAACATGATAACGTTCTTCTTGTTTTGCGCCTCTCAGACGGATCAGCTACCGGAGTTGGTAAGCAAGATGAAACAGGGGATGGTTGGTAGTGAGATGCAGTTGAAGAAGTATGGAGGAAAGTACAGGGACTTGGATTTCATCGGCGAGACACTCAAACGAGACTCGGAGGCTCCCAGGGATTTGAAGTTTGCATTGATGACACTTTCTAGTTGGTGCAGGTTTTCAACGTATGAGGCGGATTTTGGGTGGGGGAAACCGGTGTGGATAGCGTCCGTTTCGAATTTCAAGAACGGTGTGGTTTTTATGGATGCGAGAGATGGGAAAGGGATGGAAGTGCTTGTGAACATGGAAGAGCAGCACATGGCAAGGTTTGAGTGTAACCAAGACCTGCTTCAATATGCTTCTGTTGAACCTTCCGTTCAGCTCTACCACCAAGATGATCTTTCAACTTTCAACCTCTAA 1326 0.4834 MEMELIYKETMKPSSGTPPHLKTYPLSFLDVTTPPQYMPMIYFYHPKQIENQESKLALLKKSLPEALSMYYPIAGRFKGRLAIDCNDQGVPLLVTKLKCHLSHFLNNPIQPNLLPLFPDNLAWTNMNNPDHDPIMAIQINCFHCGGIAIAVCVSHKLGDISTLINFVNDWAAITNHYQHQNHTLPSPPLLDAGVSVFPQGDLPVYQEKPYFGLPKSVCKRFVFEASKIEALKATAAPIHPTRFEAVAALICKCAASALGLSPNSPLLSTVTVNLRKRIDPPVPSKTLGNMITFFLFCASQTDQLPELVSKMKQGMVGSEMQLKKYGGKYRDLDFIGETLKRDSEAPRDLKFALMTLSSWCRFSTYEADFGWGKPVWIASVSNFKNGVVFMDARDGKGMEVLVNMEEQHMARFECNQDLLQYASVEPSVQLYHQDDLSTFNL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04928 441 PANTHER F21J9.9 5 428 - -
Aip03g04928 441 Gene3D - 1 203 IPR023213 -
Aip03g04928 441 Pfam Transferase family 2 417 - -
Aip03g04928 441 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 428 - -
Aip03g04928 441 Gene3D - 214 422 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04928 Aip-Chr3 133871617 133873151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04928 1 413 Monolignol Biosynthesis Gene Families AT5G48930 24.107 1.41e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04928 - - adu:107481923 892.878