Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04927 ATGGAGAGAGAATTAATATCAAGAGAAAGCATCAAACCCTCTAAACCTACACCTTGGCACCACAGAGTCCATCACCTCTCCTTCATAGACCACATCGTTGCACGAAACTACGTCCCGGCAATTTACTTTTACCCGAACAACAACGAAGAAGACGTAACAACCAGAATATCAAGGCTCAAAAAATCGTTATCCAAAGTTCTAACCATATACTACCCTTTTGCAGGTACCTACAGGGACCAGCGATCCATCCATTGCAACGACCGAGGCGTCACATTGCTCGTTTCAAACGTCAAAACCAACCTCTCATATATTCTCAACAACCCCTCCGAATCGCTTCTGAACCCTCTCTTCCCCGATGGCCTTCAGTGGAAGGACATGGGTTCAGATGCCACCATATTAGCCATCCAAATCAACCAATTCTCTTGCGGCGGAATCGCCATTGCCGTCTGCTTGTCTCACAAACTCGGCGACGGTTCCACTCTCTTCAACTTCGTCAATGACTGGGCTACTATCAACCGAACCAATAATCAACTACCTTTCCCGCCGGATCTTGTTGCGGGATCTTCTCTATTCCCGCAAGAGGACTTGCCGGTCTTTCCTGAAATCTCGTTCACGAAGCAAAACACTGTGTGTGCAAGACTCGTGTTCGAGGGTTCCAAGATCGAGTCCCTGAAGGAAACGGTGAAATCCAACGGCGTTGAGAACCCGTCGCGGGTTGAAGTTGTGATTGGAATGATCTACAAGCGCGCCGTTTCTGCTTTGGGGCTTGGCGGCAACGTTAACGCGCCTCTTTTGCTTGTTGCCGCGAATCTCCGAAGGAGAATGGTTCCTCCGCTTCCGGAGAAGTCCATAGGGAACTGGGTCTGGTCGTTCCCCGTAGTGTCAAAGAAAAAGGAGGAAGGTGCAGGGTTGCACGAGTTGGTGGAAGAAACGAGGGAAGGTTTATCTGAGTTGTGCGAGAAGAGTGTGAAGAAGTTTGGGGATAAGGAATTTGTGATTGAGTTCCTAAGGAAGGCTACTACGGCGAGGAGAAGTAGTCCGATTGGATCGGAGAAGAGAGTGTTCTTCTTTGCGAGCTGGTGTAGGGTTCCGACGTATGAGGTGGATTTTGGATGGGGGAAGGCGGCGTGGGTGACGAGTGTTGGGTCTCCGGTCAAGAACAGTGTGGTTTTGATGGATGCCAGAGATGGGAATGGTGTTGAAGCTCTTGTCAGCATGGAGGAGCAAGATTTGGTGGTCTTTCAGCGTGATTTCGAGCTCCTTCAATATGCTTCTATTAATCCAAAGGTTCATGCATGA 1299 0.4919 MERELISRESIKPSKPTPWHHRVHHLSFIDHIVARNYVPAIYFYPNNNEEDVTTRISRLKKSLSKVLTIYYPFAGTYRDQRSIHCNDRGVTLLVSNVKTNLSYILNNPSESLLNPLFPDGLQWKDMGSDATILAIQINQFSCGGIAIAVCLSHKLGDGSTLFNFVNDWATINRTNNQLPFPPDLVAGSSLFPQEDLPVFPEISFTKQNTVCARLVFEGSKIESLKETVKSNGVENPSRVEVVIGMIYKRAVSALGLGGNVNAPLLLVAANLRRRMVPPLPEKSIGNWVWSFPVVSKKKEEGAGLHELVEETREGLSELCEKSVKKFGDKEFVIEFLRKATTARRSSPIGSEKRVFFFASWCRVPTYEVDFGWGKAAWVTSVGSPVKNSVVLMDARDGNGVEALVSMEEQDLVVFQRDFELLQYASINPKVHA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04927 432 Pfam Transferase family 4 420 - -
Aip03g04927 432 Gene3D - 2 198 IPR023213 -
Aip03g04927 432 Gene3D - 206 425 IPR023213 -
Aip03g04927 432 PANTHER F21J9.9 5 431 - -
Aip03g04927 432 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04927 Aip-Chr3 133848206 133849602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04927 11 416 Monolignol Biosynthesis Gene Families AT5G48930 22.955 2.98e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04927 - - gmx:100806928 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04927 03 133848206 133849602 Aip03g04927 03 133848206 133849602 ECH