Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04926 ATGGAAATGGAAGTGATATCAAGAGAAAGCATCAAACCGTGTTCCCCCACTCCGACTCACCTCAGAAACTACCCTCTCTCCTTGTTCGACAATGCCGTTTGTCCAAACTCAGTCCCATTAATTTACTTTTATGCCCCTCAAGAATCTCCCGACGAAGCCGCCAAAATATCGCTTCTCAAGAAATCCCTATCCCAAGCTCTATGCATATACTACCCTTTTGCCGGCAGGTTCAAAGATCCAACCTCCGTACACTGCAACGATGAAGGCGTCTCCCTTGTGGTCACCAGAATCAAAACCAAGAATCTCTCCAACATTCTCCGCAACCCAACGGACGCCCTCTTGAGCCCCTTGTTCCCCGACGAGCTGCAGTGGAAGGATATGGGCTTGGAGTCGAGCTTGTTGGCAGTTCAAATTAACTGTTTCGCGTGCGGCGGAATGGCCATAACCGTATGCATGTCTCACAAGGTTGGTGACGCTTCCACTTTGTTCAACTTCTTCAACGATTGGTCAACGCTCACCCAACAACCTCACACCACAGTAGCCTTACCCCATGTTGGAGCTTCGCTTTTCCCACAAAGCCACTTCCCACTTCCCCGCCAATATTCCTTCGTCCCTCACCACAACATGGTGTGTAGAAGGCTTGTGTTCGAAGGTTCCAAAATTGATTCCCTTAAGGCCTTGGTTTCGTCGTCGTCGTCTTCTCAGAAGGTGGAGAACCCTACTAGGTTTGAGGTTGTGGTTGCACTGATTTACAAGTGTGCTGTTTCGGCGTTGGGATTGAGTGTTAGCAACACGCTCTTGCGTGCTGCCATCAACTTCCGCAAGAGAATGATTCCTCCGCTGCCGGACAAGTCCTTAGGGAACTTGGTTTCGAGCTTCTATGCTTCCTCCATGGACAATGATGAAGTGGAGTTGCACGAGTTGGTGACCAAAACAAGAGAAGGCCTAGCTTTGTTTTGTGACAAGTATGTAAGAAACTTTGGGGACTTGAAATTCGTGTCGGAGTTCGTAACATTTGGACAAGCTGTTACTACTGATAATAAGAGTAGTTGTGAGGATGGGGAGAAGAAGAAGAAGAAAGATATGATGTTTTTCTCTGGGTGGTGTAGGTTTTCGGCGTATGAAGCGGATTTTGGGTGGGGGAGGCCAGTGTGGGTGACCACTGTTTTGTGTCCTGTGAAGAACAGCGTGGTTTTGATGGATACGAGAGATGGGAAAGGGATTGAAGCGGTTGTGTGCATGCTTGACAAAGACATGGCCATGTTTGAGCGTCACGTTCATCTTCTTCGCTATGCTTCTCTTGAACCAAACCGTTGGACATGCTCATCATGTTCTTGA 1338 0.4821 MEMEVISRESIKPCSPTPTHLRNYPLSLFDNAVCPNSVPLIYFYAPQESPDEAAKISLLKKSLSQALCIYYPFAGRFKDPTSVHCNDEGVSLVVTRIKTKNLSNILRNPTDALLSPLFPDELQWKDMGLESSLLAVQINCFACGGMAITVCMSHKVGDASTLFNFFNDWSTLTQQPHTTVALPHVGASLFPQSHFPLPRQYSFVPHHNMVCRRLVFEGSKIDSLKALVSSSSSSQKVENPTRFEVVVALIYKCAVSALGLSVSNTLLRAAINFRKRMIPPLPDKSLGNLVSSFYASSMDNDEVELHELVTKTREGLALFCDKYVRNFGDLKFVSEFVTFGQAVTTDNKSSCEDGEKKKKKDMMFFSGWCRFSAYEADFGWGRPVWVTTVLCPVKNSVVLMDTRDGKGIEAVVCMLDKDMAMFERHVHLLRYASLEPNRWTCSSCS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04926 445 Pfam Transferase family 2 427 - -
Aip03g04926 445 Gene3D - 1 198 IPR023213 -
Aip03g04926 445 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 437 - -
Aip03g04926 445 PANTHER F21J9.9 4 437 - -
Aip03g04926 445 Gene3D - 206 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04926 Aip-Chr3 133843696 133845576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04926 1 424 Monolignol Biosynthesis Gene Families AT5G48930 23.632 7.32e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04926 - - gmx:100806928 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04926 03 133843696 133845576 Aip03g04926 03 133843696 133845576 ECH