Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04889 ATGAGGAGGAACTGCAACTTAGAACTACGGCTTTTCCCTTCTCCTGCCTCCGACCACCGCTCCATGGAAGAAGAAGAAAGTAGGAGTAGCCCGTTACAAGGACAGCAGACACCGCAATCACACCCACTCACCATATTCTACGATGGCAAGATTTCCGTTTGTGACGTCACTCAATCTCAGGCAAGATCCATCTTAATGCTTGCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACCAACATCAACTGGGTCTTCAGTGGAGCCATGTTCACCAGCATTGCTTCAATCATCGTCACAGCAACAACAATATTATAATAATAATTTGCATAGCCCCGGGAGTAGTCTTTCCATGA 360 0.4222 MRRNCNLELRLFPSPASDHRSMEEEESRSSPLQGQQTPQSHPLTIFYDGKISVCDVTQSQARSILMLARXXXXXXXXXXXHQHQLGLQWSHVHQHCFNHRHSNNNIIIIICIAPGVVFP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04889 119 MobiDBLite consensus disorder prediction 12 43 - -
Aip03g04889 119 ProSiteProfiles Tify domain profile. 36 70 IPR010399 -
Aip03g04889 119 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 70 IPR040390 -
Aip03g04889 119 MobiDBLite consensus disorder prediction 28 43 - -
Aip03g04889 119 SMART tify_2 36 70 IPR010399 -
Aip03g04889 119 PANTHER - 1 70 - -
Aip03g04889 119 Pfam tify domain 38 68 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04889 Aip-Chr3 133369052 133369668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04889 1 68 Tify Gene Family AT1G30135 45.205 7.63e-10 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip03g04889 tify 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04889 - - gmx:100305565 78.1814