Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04879 ATGTCTGAGGTTTGGTTATCTCTGAAGAATTCACTTCATTATTGCAAACCTCACTCAACAGAAGTTCATGATCCCATGACAAGTAGAAGGCAGCACCATAGAAAACAAAACGCACGAGACAAAGTCATAGAAGGTTCAAATTCAGAGAAACAACATAGTGGTGGTGATGATGCAATAATCTTTGATCCTGTCACACATGATATTGTCCTTGATGACACGAGCGAGGAAATTAAGATTAAGACTTATCTATCTTATCCTTACACTCACATCAATAATACTCGCGAAGATGGTGGCAACAAAGGGATGGAAGAATCATCAAATAGATCAACAAGAAGAGGTATGTCTTTGACGAAAACACAATATGTTGATTGTTACCAATGCAGTGGTTACTTAAAGTCAAAGATTTCGATGCACAAAGGTTCTAATAGGGTTCCACTAACATCAACATGTCATCATGATCATCATCATCAATGTCGTGACAAACAAGAAAAATGTGTGGAAGATTACAATATCACTGAGAATTCAGTTTTGCAACTTCACAGAGAAGATTCATCTTGGAAGATCATAGAAAGAATTTGCCAAACCAAACATATGAACCCTCAAACTACTGAAACCAATGCAGCAGCACATATAGAATGTGTCTTAAAAGTTCTTACCACTCCACAAACACTCGCTTCCTTTGAGGAATGCAGAGAAAGAGTGAGAAACATAGCTGAGAACATGCAACCTCGATGCATAGCTGATGGAAATGAAGTCATGAGGTTTTATGGAACAACCATTGCATGCTCCCTTGGTCTAGTAAATTACTCTTCTATCCTCAGCTGCACTTTAGAACAATGTGGTTTGTGCCAAATTCTGAAGCATGGTTTCAACGCAAACCAAGAATTCCATGGTGAACGTGGGGTTCTCACCACTGCTACAAGTGATCAAGCCTTTGATTCCATTATTTTATTTGAATACAACGAGGAAGCATTACCAATATTGAGGAAGTGTGTTATAGTGTGCAGAGTAATTGCTGGAAGAGTTCACAATCCTTTGCAAGAGATTCAGGAAGAGACTGATTCGGGTTTTGATTCATTGATCAAGAAAATAAGCCGTGACTCATCAGATATTGAAGAACTCTGTATTTTGAATCCTAGAGCTATATTACCTTGCTTTGTGGCAACTACTCCCATGAAGATGCCAAAAACATCTTTTCATGATGATCCTTGTTTAAAAAGTGTAACTTATTTGTTTAGCAACATTTTGAATAAAGCTACTCCAGTACAAAATGGCCAGAAGGCCAAGAACACTTTGCCATTTACATTCTTCCCTTTTGCTCGTGCTCTGACTCGAATGGCCTCTCCTTCTATGCCCAAACGGCAACAGCAACACTCCAGATTTGATGAAAAGCCTACACCTGCTAGCAAGAGTTCCTTTCATTAA 1425 0.3867 MSEVWLSLKNSLHYCKPHSTEVHDPMTSRRQHHRKQNARDKVIEGSNSEKQHSGGDDAIIFDPVTHDIVLDDTSEEIKIKTYLSYPYTHINNTREDGGNKGMEESSNRSTRRGMSLTKTQYVDCYQCSGYLKSKISMHKGSNRVPLTSTCHHDHHHQCRDKQEKCVEDYNITENSVLQLHREDSSWKIIERICQTKHMNPQTTETNAAAHIECVLKVLTTPQTLASFEECRERVRNIAENMQPRCIADGNEVMRFYGTTIACSLGLVNYSSILSCTLEQCGLCQILKHGFNANQEFHGERGVLTTATSDQAFDSIILFEYNEEALPILRKCVIVCRVIAGRVHNPLQEIQEETDSGFDSLIKKISRDSSDIEELCILNPRAILPCFVATTPMKMPKTSFHDDPCLKSVTYLFSNILNKATPVQNGQKAKNTLPFTFFPFARALTRMASPSMPKRQQQHSRFDEKPTPASKSSFH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04879 474 MobiDBLite consensus disorder prediction 37 51 - -
Aip03g04879 474 MobiDBLite consensus disorder prediction 94 113 - -
Aip03g04879 474 Gene3D - 166 391 - -
Aip03g04879 474 SUPERFAMILY ADP-ribosylation 176 391 - -
Aip03g04879 474 MobiDBLite consensus disorder prediction 18 58 - -
Aip03g04879 474 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 389 - -
Aip03g04879 474 MobiDBLite consensus disorder prediction 447 474 - -
Aip03g04879 474 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04879 Aip-Chr3 133110558 133115092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04879 156 388 C2H2 Transcription Factor Family AT5G54630 42.562 1.73e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04879 - - ahf:112735647 979.163