Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04867 ATGTCGACTAAAGGAATATGCGGATCCAAAGATGAGTTTCGGTTTACTTGCTATTGCCCTGATGGAACTAATCATGCTTTGGATTGTTCTCATCATCATAGTAAATTGAATTGGAAAAAGAAAGTTGCCATAGGAGTTGCTGCTGCTGTGCTTAGTGCAGTTATATTAGGCATTGCCTTTAGTCTCTATTACCGTAGATGGAAGAAGAATTTTCAAGATGTATCATTTGTACCATCTCACAGCATGTCTTCTTTTTTAGAAGACACTGAAAAGGGACATCAAAAATACTCTGGACTCCAATTCTTTGCCTATAGAGAACTTCAAGAGGCCACAAACAACTTTGATCCAGACAGAGAACTAGGAGATGGAGGCTTTGGGAAAGTATATTTTGGAAAACTTGGAGACGGCCGTTTTGTTGCTGTGAAAAAGATGTATGAGAACAATTACAGGACAGTAGAGCAATTCATGAATGAAGTTGAGATCTTAACAGGCTTGCGCCACCAAAATCTGGTATCACTGTATGGATGTAATTCCAGCCACAGCAGCGAATTAATGCTTGTGTACGAATATGTTTCGAACGGAACAGTTGCAGATCATCTCCACGGACAGAAAGCGAAATCTGGTGCTCTCTGTTGGGATACCAGAATGAAGATTGCTATAGACACAGCTAGTGCATTGGTATATCTTCATGCTTCAGACATCATCCACAGAGATGTTAAAACCAATAATATCCTTCTTGATGATCACTTTAGAGCCAAAGTAGCCGATTTTGGACTCTCAAGACTATTTCCAAACCACTTAACTCACATTTCCACAGCGCCACAAGGCACACCTGGTTATGTTGATCCGGAGTACCACGAGTACTACCAGCTGACGGATAGAAGCGATGTGTACAGTTTTGGAGTTGTGCTGATTGAACTAATATCTTCAATGCGTGCAGTTGACATAACAAGGCATAGGCATGAGATCAATTTGTCGAACATGGCCATGAAGAAGATTCAGAGTGGTGCGTTGCATGAGATTGTAGACAAAAGCCTTGGATTCGAATCGGATTTGAGGGTAAGGAAGATGATCAATGGTGTTGCAGAGTTGGCATTTCGGTGCTTGCAGAGTTCTAAGGATATGAGGCCTTCAATGGTACAAGTGTTGGATACTTTGAAGGATATACAAAGTGATGGGAAATATAAAAGCAAACCAGAGGTGATGGATATATCAAAACAAGAAGATAATGATGCAACCGTGCTTAAGAACGAACCACCTCCACCTTCACCTGATTCAAATGGAAGAGTATAG 1293 0.4091 MSTKGICGSKDEFRFTCYCPDGTNHALDCSHHHSKLNWKKKVAIGVAAAVLSAVILGIAFSLYYRRWKKNFQDVSFVPSHSMSSFLEDTEKGHQKYSGLQFFAYRELQEATNNFDPDRELGDGGFGKVYFGKLGDGRFVAVKKMYENNYRTVEQFMNEVEILTGLRHQNLVSLYGCNSSHSSELMLVYEYVSNGTVADHLHGQKAKSGALCWDTRMKIAIDTASALVYLHASDIIHRDVKTNNILLDDHFRAKVADFGLSRLFPNHLTHISTAPQGTPGYVDPEYHEYYQLTDRSDVYSFGVVLIELISSMRAVDITRHRHEINLSNMAMKKIQSGALHEIVDKSLGFESDLRVRKMINGVAELAFRCLQSSKDMRPSMVQVLDTLKDIQSDGKYKSKPEVMDISKQEDNDATVLKNEPPPPSPDSNGRV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04867 430 Gene3D Phosphorylase Kinase; domain 1 85 190 - -
Aip03g04867 430 MobiDBLite consensus disorder prediction 393 413 - -
Aip03g04867 430 Pfam Protein kinase domain 117 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04867 430 MobiDBLite consensus disorder prediction 393 430 - -
Aip03g04867 430 Gene3D Transferase(Phosphotransferase) domain 1 191 403 - -
Aip03g04867 430 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 426 IPR044652 -
Aip03g04867 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Aip03g04867 430 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 426 - -
Aip03g04867 430 SUPERFAMILY Protein kinase-like (PK-like) 96 386 IPR011009 -
Aip03g04867 430 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Aip03g04867 430 ProSiteProfiles Protein kinase domain profile. 114 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04867 430 SMART serkin_6 114 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04867 Aip-Chr3 133009894 133012791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04867 41 426 Receptor kinase-like Gene Family AT1G25390 54.707 1.72e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip03g04867 Pkinase 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04867 - - gmx:100794703 605.905