Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04853 ATGTGCCTATTCTTCCGCTGGTGGCAAAAGAGTTCAAGGGACAGTAACCCCGAAAACTCTACCACGTGCCGCCACTTTACCATCGCCGAGATAAGATCCGCCACCAACAACTTCGACCAAGCCCTAATCATAGGCCGCGGAGGCTTCGGCAATGTTTATAAAGGCAAGTTCCCCAAGCACCGCTCCCCCGTGGCCATCAAGCGCCTCAATCAGGGTTCCAATCAAGGACTCCGCGAGTTCCAAACGGAGATCAAGATGCTGTCCCACCTCCGCCATCCTCACCTCGTCTCCCTCATCGGCTACTGCCAGGACGCCGCCGAGATGATCCTCGTCTACGACTACATGGCGCGTGGGACCCTACGCGAGCACCTCTACGACTACGACACCAGCAACAACCAACAACCCCTCTCGTGGAACAAACGCTTGGAGATATGCCTTGCTGCGGCGCGTGGGCTTCACTTCCTGCACACAGAGAACGTGATCCACCGGGACGTGAAGAGCACGAACATACTGCTTGACGATGATTGGATCGCGAAAGTTGCGGATTTCGGTTTGTCGAAGGACGGGCCGAATGGTTCCCACGTGACAACGGACGTGAAGGGTAGTTTGGGGTATTTGGACCCGGAGTACTACATGAGTCAGTGGTTGAGTCAGAAGTCTGACGTGTACTCGTTCGGGGTTGTTTTGTTGGAGGTGTTGTGTGGGAGGCCAGTGATCAAGCGTAGGATCGAGAATAGGCAGGAGGAGTCCCTTGTGATTTGGGTAAAAAGCTGTTATCAAGATGGCAACGTTGATCTGACGGTGGATCCTGCCTTGAAGGGTACCATTGGGCAAAAGTGTTTGGACAAGTTTGTTGAGGTTGCCTTGAGTTGTTTGAACGATCATGGCAAGGAACGCCCTTTCATGAAGGATGTGGTGAAGGGCTTGGAGTGTGCCTTGAGCCTGCACCTCACTGGTGCCCATCCAAAAAGGGGCAAGAACAACAGCGATGACGTGGCAGTCAGCTTCACCGTCCTTGTGGGCCATGATTATGATGACAATTCTCGGGGACTAGTCATGACCGACTCTCAGTGTATTATTACTACTACCAGTAGTAATGCTGCAACTACCACTACCACTACCACTACCAGCACCACCACAAGCACCACCACTTCCAACGAGGAGGAGAAAGCTTTGGTGCAGCATGGGGTCTTCTCTCACCTTGGTAATCCAACACCTACATACTTATCTGTTTGCACTGATAAATGA 1248 0.5256 MCLFFRWWQKSSRDSNPENSTTCRHFTIAEIRSATNNFDQALIIGRGGFGNVYKGKFPKHRSPVAIKRLNQGSNQGLREFQTEIKMLSHLRHPHLVSLIGYCQDAAEMILVYDYMARGTLREHLYDYDTSNNQQPLSWNKRLEICLAAARGLHFLHTENVIHRDVKSTNILLDDDWIAKVADFGLSKDGPNGSHVTTDVKGSLGYLDPEYYMSQWLSQKSDVYSFGVVLLEVLCGRPVIKRRIENRQEESLVIWVKSCYQDGNVDLTVDPALKGTIGQKCLDKFVEVALSCLNDHGKERPFMKDVVKGLECALSLHLTGAHPKRGKNNSDDVAVSFTVLVGHDYDDNSRGLVMTDSQCIITTTSSNAATTTTTTTTSTTTSTTTSNEEEKALVQHGVFSHLGNPTPTYLSVCTDK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04853 415 Gene3D Phosphorylase Kinase; domain 1 6 114 - -
Aip03g04853 415 SUPERFAMILY Protein kinase-like (PK-like) 21 307 IPR011009 -
Aip03g04853 415 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Aip03g04853 415 Pfam Protein tyrosine and serine/threonine kinase 43 308 IPR001245 GO:0004672|GO:0006468
Aip03g04853 415 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04853 415 PANTHER OS07G0166700 PROTEIN 10 377 IPR045272 GO:0004714|GO:0006468
Aip03g04853 415 SMART serkin_6 38 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04853 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Aip03g04853 415 Gene3D Transferase(Phosphotransferase) domain 1 115 328 - -
Aip03g04853 415 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 10 377 - -
Aip03g04853 415 CDD STKc_IRAK 44 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04853 Aip-Chr3 132770584 132772094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04853 20 404 Receptor kinase-like Gene Family AT3G51550 48.593 7.23e-116 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip03g04853 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04853 - - adu:107482052 774.622