Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04830 ATGTCTGTGGCTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGAATGGTTGCATCACAACCTCTTAAAGCCGGCCAAATTGTCCTTAGAGATTCTCCTATCCTGCTCTATTCTGCTTTGCCATTGATCCCGCAGTCTTTATCTTCGTCCTCCTCTACCCTAGCCTCCTCCTTCTGTGATCACTGCTTTAGAACCTTACCATCCTCTTTACAGGGCGATTCTTCATCTTCCGCAGTTTTGTGCCCTTCATGTAGACATTATCGTTTTTGCAGCTCTAATTGTCTCTCAAAGGCATTGAATTCATCTCATTCTTCTTGGGTATGTCAAGCATTGTCTCACTTCCAAGCCAACTCTCCTCTTCTTGGACATCCCCTTGAGCTTCAAGTCCAGGCTCAATTTCTCATTGCTGCGTACAATCTTGCCAATATCTCCCCCTCAGACTTTCAAATCTTGCTTTCTCTTCATGGTTCTCCTGATGACGCTACAATTTCTGCAGCTCAATTCCTACACCCTCTTATTTCATCCCTCTGCTCAATTGCTCCCATTGGTCTTCAGAATGTATTTTCTTTGGAACTCACCTCTGCGCTTCTGGCCAAGGACAAGCACAATGCCTTTGGCTTAATGCAGCCTGTTTCTGTTGATGATGGCCAGAGGTCTGTTAGAGCTTATGGTATATACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATAGTAATCCACCAGATGGCAGTAATAATACTGACATTATTGTTAGGATGATTCATGATGTTCCTCAAGGCAGGGAGATCTGTTTGAGCTATTTCCCTGTCAATGAAAACTATGCTAGCAGGCAGAAGAGATTGATGGAAGACTATGGCTTCACCTGTAATTGTGATCGGTGTAATGTCGAATCAAATTGGTCAGATAATGATGACACTATCGAAGAAGATAATGCAGAGGATGGAGAAGAGGTTATGGATGAGGAGGACCAATATGAAAACATGGCAGCGTCAGATACAGACAATAATAATGATTTCCCACACGCATATTTCTTTTTAAGCTCCCATGGAGGACTGAGTCACCAGGTTCCTACTGTTGCATTGTTTCATGTGGATTGA 1146 0.438 MSVAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLIPQSLSSSSSTLASSFCDHCFRTLPSSLQGDSSSSAVLCPSCRHYRFCSSNCLSKALNSSHSSWVCQALSHFQANSPLLGHPLELQVQAQFLIAAYNLANISPSDFQILLSLHGSPDDATISAAQFLHPLISSLCSIAPIGLQNVFSLELTSALLAKDKHNAFGLMQPVSVDDGQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPPDGSNNTDIIVRMIHDVPQGREICLSYFPVNENYASRQKRLMEDYGFTCNCDRCNVESNWSDNDDTIEEDNAEDGEEVMDEEDQYENMAASDTDNNNDFPHAYFFLSSHGGLSHQVPTVALFHVD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04830 381 Gene3D - 64 123 - -
Aip03g04830 381 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Aip03g04830 381 SUPERFAMILY SET domain 8 306 IPR046341 -
Aip03g04830 381 Pfam SET domain 19 283 IPR001214 GO:0005515
Aip03g04830 381 CDD SET_SMYD 208 310 - -
Aip03g04830 381 SMART set_7 8 290 IPR001214 GO:0005515
Aip03g04830 381 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 362 IPR044238 -
Aip03g04830 381 Gene3D - 124 210 - -
Aip03g04830 381 Gene3D SET domain 21 310 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04830 Aip-Chr3 132551648 132553753 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip03g04830 SET 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04830 - - gmx:100783406 578.17