Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04783 ATGAGTTGTGGAGACAGGCCAAATATGCATGAGCAACCTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTCAGTACTCCAAAACTAAAAGATACCTTTCCTCAAACACTCTCAGACCCATCATCATCACCATCACCACTTATTGTTGTAGGCAACACTACAAACAGCAACAATAACCTTGAAGAGAATATCAGACTTTCTATGGAGGAGTTATCCTATCACCACCAGCAAGAAGATGTCTCCAACTATGTAAATGGAGTCACTGCCACAACCATAGATATCCCACATCCACAGCATCTTGGTTTGAATATGGGTAACTCCTACAACAACAATATCAACATGGATTCCCATTTGGTTCAGCATGAAATTGATATCCTTCCCTATCAGCAACCCACTTGGGATCCCAATGTTCAGGAAATGCAAGATATGGGTTATACTAATCACTCAGAACACCAACCACATGATCAGCAATTTCAGCAAACTGAGGCACAGAACTGCAGCCAAAGTTACAATCCCTCCTCCATTTTGGACCCGCCTTACCCTTCACAAGATCTCCTAAACCTTCTTCACTTGCCAAGATGCTCAACTTCGTCTTTGCTTGCCAACCCTGCTATCTGCATCGCAAACAAGACACAGAATTTTCAGAATCCGATGGGATTTCTTGGGGACCTTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTATTGTATGATCCTCTACTCCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTTCCCCGTGGCTACAGCTTGCCAACAAACTCAAGAAGTGGTTCTCTTTTCGGTGGAGGGGATGAGATTGAAGGAGATGGAAGCCAACTTGACATGGGAGTGCTCGACTTCAACAGGGTCACGGCTTCCGTGGGCAAAGGAAGGGAAGGAAAAGGCACCAAACACTTTGCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGCAAATACAAAATCCTGAGGAGTCTTATCCCAAGCCCCACAAAGATGGATAGAGCTTCTGTGGTGGGTGATGCCATTGAATATATAAGGGAGCTGCTCAGAACGGTCAATGAGCTCAAATTACTGGTAGAGAAGAAAAGATATGGAAGGGAGAGATGCAAAAGGCAGAAAGCGGAAGATGATGCTGCAGAGAGCTGCAACATAAAGCCTTTCAGCGATCCAGATGGATGCATAAGGACCTCATGGCTTCAAAGGAAATCAAAAGATAGTGAGGTTGATGTGCGAATTGTTGATGATGATGTTACAATCAAACTCTTCCAGAGGAAGAAGATTAACTGTCTGCTTTCAGTCGCCAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATGTTGCAGGTGGACATGTTGGCGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATAGAAGGTTCTTCAGTCTATGCCAGTGCTATAGCCAACAGGGTGATCGATGTTATGGACACTCAGTATGCAGCAGCAGTTCCACATACAAGTAGCTATTAG 1527 0.4453 MSCGDRPNMHEQPGCFDPNTMAEGVSTPKLKDTFPQTLSDPSSSPSPLIVVGNTTNSNNNLEENIRLSMEELSYHHQQEDVSNYVNGVTATTIDIPHPQHLGLNMGNSYNNNINMDSHLVQHEIDILPYQQPTWDPNVQEMQDMGYTNHSEHQPHDQQFQQTEAQNCSQSYNPSSILDPPYPSQDLLNLLHLPRCSTSSLLANPAICIANKTQNFQNPMGFLGDLPIGSDNTSASSVLYDPLLHLNLPPQPPALRELFQSLPRGYSLPTNSRSGSLFGGGDEIEGDGSQLDMGVLDFNRVTASVGKGREGKGTKHFATEKQRREQLNGKYKILRSLIPSPTKMDRASVVGDAIEYIRELLRTVNELKLLVEKKRYGRERCKRQKAEDDAAESCNIKPFSDPDGCIRTSWLQRKSKDSEVDVRIVDDDVTIKLFQRKKINCLLSVAKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVMDTQYAAAVPHTSSY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04783 508 Gene3D - 307 384 IPR036638 GO:0046983
Aip03g04783 508 Pfam Helix-loop-helix DNA-binding domain 313 359 IPR011598 GO:0046983
Aip03g04783 508 MobiDBLite consensus disorder prediction 147 171 - -
Aip03g04783 508 MobiDBLite consensus disorder prediction 1 47 - -
Aip03g04783 508 PANTHER TRANSCRIPTION FACTOR BHLH91 9 506 - -
Aip03g04783 508 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 377 IPR036638 GO:0046983
Aip03g04783 508 MobiDBLite consensus disorder prediction 30 47 - -
Aip03g04783 508 SMART finulus 316 365 IPR011598 GO:0046983
Aip03g04783 508 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 310 359 IPR011598 GO:0046983
Aip03g04783 508 PANTHER TRANSCRIPTION FACTOR BHLH91 9 506 IPR045895 GO:0006355|GO:0048658
Aip03g04783 508 CDD bHLH_AtMYC1_like 315 379 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04783 Aip-Chr3 132103234 132104936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04783 9 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.793 2.78e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip03g04783 HLH 4.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04783 - - gmx:100782512 772.311