Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04778 ATGAAATTTCACCTGCAAATATATTTCAGACCATTCAAGAAAGAGAAATCTGTTCCGTTAAGAGTTTCGGCAGAGTCAACAATGCAGCCAACTAATGCACTGAATTATGCAAATGCATACACTGCGCTTAACGTCAAGAGAACAAAACCTCAAGAACCATTTGACAGAATGCTACTCGAGGGAGTTGGTAGTTCTAAAGACTTGAGAAATTTGTGCCCTTTGGCTCCCAAGCAATGCATGATGGATACTACCCTTAATAGCAACAACACTATGATACCTTTTGCACCTAAGAAAGAGATGAAGAACGTGACAATTAAGGCAATATATAAAGAAGATATCGCAAGGTTTAGGGTGTCTTTGAACTGTGGCATTGTTGAACTGTAG 384 0.3906 MKFHLQIYFRPFKKEKSVPLRVSAESTMQPTNALNYANAYTALNVKRTKPQEPFDRMLLEGVGSSKDLRNLCPLAPKQCMMDTTLNSNNTMIPFAPKKEMKNVTIKAIYKEDIARFRVSLNCGIVEL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04778 127 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 13 75 - -
Aip03g04778 127 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 81 127 - -
Aip03g04778 127 PANTHER PROTEIN NLP8 13 75 IPR045012 GO:0003700
Aip03g04778 127 PANTHER PROTEIN NLP8 81 127 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04778 Aip-Chr3 132077486 132077869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04778 54 127 NLP Transcription Factor Family AT4G24020 44.565 5.48e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04778 - - var:108346096 108.997