Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g04774 | ATGGCTTCCTTCACAATTGGTCCTCATCATCGCCATTTGTCACATGACTCTGATGAGGTTCGCCCTCCTACTCGACAATCTGCTTCATCGAAAGTACAATGCCGAGTTTGTGGTGATGAGATTGGAAATAAGGAAGATGGAGGGTTATTTGTGGCATGTTATGTGTGTGGCTTCCCTGTTTGTCGACCCTGCTATGAGTATGAGAGAAGTGAAGGCACACAGTGCTGTCCTCAGTGCAACACTCGCTATAAGCGTCACAAAGGATCTCCTAGAGTAGTAGGAGATGAAGAGGAGAACTTTGATGCAGATGATTTTGATGATGAATTTCAGATTAAGACTGGCCATGATCATGATCATGATCATGATGATGTTAATCATGCGGTAATGCATGCCTTTGATCATATTAAAAGATCATGCATGAGAATATTAATATGGCATTTGGTTTACTATTCTTTAGTTACCGGTAAAGACATTGAAGGGGACAAAGAATTCTACAGCAATGCAGAGTGGGAAGAAAGGGTAGAGAAATGGAAAGCCAGACAAGAAAAGAAAGGCCTCCTAAACAAAGAAGAAGGGAAAGACGATCAAGATGAAGAAGAAGATGAGTACCTTTTGGCTGAAGCTAGACAACCATTGTGGCGTAAAGTTCCAATATCTTCAAGCCTGATCAACCCATACCGGATAGTGATTGTGATGAGGCTGGTGATTCTGGCTTTCTTCTTGCACTTCCGCATCATGACTCCAGCACATGACGCTTTCCCACTGTGGTTAACATCTGTGATATGTGAGATATGGTTTGCATTCTCATGGATCCTTGACCAGTTCCCTAAATGGTTCCCCATCACGCGCGAGACTTACTTGGACCGCTTGTCCATAAGGTTCGAGCGCGAAGGGGAACCAAACAAGCTTTCCCCTGTTGATGTCTTTGTCAGTACTGTGGACCCTTTGAAGGAACCTCCAATCATAACAGCCAACACCGTCCTTTCCATCCTCTCCGTCGATTACCCGGTCGAAAAGGTTTCCTGCTATGTATCAGATGATGGTGCTTCTATGCTTCTCTTTGACACACTTTCGGAAACCTCTGAGTTTGCAAGAAGATGGGTTCCATTTTGCAAGAAGTATAATATTGAGCCAAGAGCTCCTGAGTTCTATTTCTCTCAGAAAATCGATTACTTGAAAGACAAGGTACATCCTATGTTTGTCAAGGAACGCAGGGCCATGAAGAGAGAATATGAAGAATTTAAAGTGAAGATTAATGCTTTGGTGGCAAAGGCTCAGAAGAAACCAGAGGAAGGTTGGGTAATGCAGGATGGAACACCATGGCCTGGGAATAACACTCGTGATCATCCAGGAATGATTCAGGTGTACTTGGGAAGTGCTGGTGCACTTGACGTGGAAGGCAAGGAACTGCCGCGACTTGTGTATATTTCGCGTGAAAAACGTCCTGGCTATCAACATCACAAAAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCTTTCATGTTGAATTTGGATTGTGACCACTACATAAACAATAGCAAGGCTATAAGAGAAGCTATGTGCTTCTTAATGGATCCTCAGCTTGGGAAGAAGCTCTGCTATGTCCAATTCCCACAAAGGTTCGATGGTATTGATCGACATGATAGATATGCCAATCGCAACATTGTATTCTTCGATATCAATATGAAAGGCCTAGATGGGATCCAAGGTCCAGTGTATGTTGGTACTGGAACTGTTTTCAATAGGCAGGCATTGTACGGATATGATCCACCAGTGTCCGAGAAAAGGCCAAAGATGACGTGTGATTGTTGGCCTTCCTGGTGCTGCTGCTGTTGTGGTGGTTCAAGGAAATCAAAGTCAAAGAAGAAATCAGGTGGAGGAGGTCTTTTCAGTAAATTGTACAAGAAGAAAAAGATGAAGGGGAAGAACTATGTTAGAAAAGGGTCTGAGCTGATGTTTGATCTTGAAGAGATTGAAGAAGGGCTTGAAGGCTTTGATGAGCTAGAGAAATCATCTCTAATGTCTCAGAAACAGTTTGAGAAGCGATTCGGGCAGTCGCCTGTTTTCATTGCTTCCACTTTGATGGAGAATGGTGGACTTCCTGAAGGCACTAATTCTCAAAATCTTATAAAGGAGGCCATTCATGTTATAAGTTGTGGTTATGAAGACAAAACCGAATGGGGAAAAGAGATTGGGTGGATTTATGGCTCAGTGACAGAAGATATCTTAACAGGGTTCAAAATGCACTGTAGAGGGTGGAAATCAGTGTACTGCATGCCAAAGAGACCAGCTTTCAAGGGATCTGCACCAATAAATCTATCAGATAGGTTGCACCAAGTTTTGAGATGGGCTCTTGGTTCTGTTGAAATTTGCCTTAGTCGCCATTGTCCCCTGTGGTATGGCTATGGAGGAAAGCTTAAGTGGCTAGAAAGGATGGCTTATACCAACACCATAGTATATCCATTCACTTCCATTCCTCTCCTTGCATATTGCATACTACCAGCTGTGTGTCTTCTTACTGGAAAATTCATCATTCCCACCTTGACAAACCTTGCTAGTGTTTGGTTCATGGCTCTATTTATATCCATCATCCTAACCGGTGTCCTTGAGCTTCGGTGGAGCGGAGTTAGCATCGAAGATTGGTGGCGAAACGAGCAATTTTGGGTGATTGGAGGAGTTTCGGCACACCTTTTTGCTGTGTTCCAAGGCCTCCTGAAAGTTCTTGGAGGAGTAGACACCAACTTCACAGTTACAGCAAAAGCAGCAGATGATACTGAGTTCGGAGAGTTATACCTTTTCAAGTGGACAACACTTCTGATCCCACCAACCACCCTCATAATATTGAACATGGTTGGGGTTGTGGCTGGTGTCTCTGATGCCATTAACAATGGATATGGCACATGGGGACCTTTATTTGGGAAGCTATTCTTTGCATTTTGGGTTATTGTTCACTTATATCCTTTCCTAAAGGGTCTCATGGGAAAGCAAAACAGGACTCCAACCATTGTGGTTTTATGGTCAATTCTGCTAGCATCCATTTTCTCATTGATTTGGCACTCAAATGTTGGCGGTGACAAAGGCGAGAAGGACTTCTCCGGGATGACGGGATACGGGATCACCATTGATCTCACCAGCAATTATAACGCGGTCACATATGTCGTGATTTTCTCAGCAGCCGTTGGTGTTGTTCTGAGAGGCCAAGACAACATTCTAACCGGGGTGCATTGCTATAACAAAGCATCATCTTTTGGTGGTGTGGGGACCTTGATGAATGGGTTGTTTCTTGGTGATGCTAATGTTTTGTTGATCAAGTTGTAG | 3342 | 0.4366 | MASFTIGPHHRHLSHDSDEVRPPTRQSASSKVQCRVCGDEIGNKEDGGLFVACYVCGFPVCRPCYEYERSEGTQCCPQCNTRYKRHKGSPRVVGDEEENFDADDFDDEFQIKTGHDHDHDHDDVNHAVMHAFDHIKRSCMRILIWHLVYYSLVTGKDIEGDKEFYSNAEWEERVEKWKARQEKKGLLNKEEGKDDQDEEEDEYLLAEARQPLWRKVPISSSLINPYRIVIVMRLVILAFFLHFRIMTPAHDAFPLWLTSVICEIWFAFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNKLSPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVHPMFVKERRAMKREYEEFKVKINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKSGGGGLFSKLYKKKKMKGKNYVRKGSELMFDLEEIEEGLEGFDELEKSSLMSQKQFEKRFGQSPVFIASTLMENGGLPEGTNSQNLIKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEICLSRHCPLWYGYGGKLKWLERMAYTNTIVYPFTSIPLLAYCILPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAADDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGTWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWHSNVGGDKGEKDFSGMTGYGITIDLTSNYNAVTYVVIFSAAVGVVLRGQDNILTGVHCYNKASSFGGVGTLMNGLFLGDANVLLIKL | 1113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g04774 | 1113 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 23 | 119 | - | - | |
Aip03g04774 | 1113 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 162 | 1026 | - | - | |
Aip03g04774 | 1113 | Pfam | Zinc-binding RING-finger | 31 | 99 | IPR027934 | - | |
Aip03g04774 | 1113 | CDD | mRING-HC-C4C4_CesA_plant | 34 | 82 | - | - | |
Aip03g04774 | 1113 | SUPERFAMILY | RING/U-box | 28 | 100 | - | - | |
Aip03g04774 | 1113 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 414 | 598 | IPR029044 | - | |
Aip03g04774 | 1113 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 319 | 838 | IPR029044 | - | |
Aip03g04774 | 1113 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Aip03g04774 | 1113 | Pfam | Cellulose synthase | 306 | 1027 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Aip03g04774 | 1113 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 15 | 108 | IPR013083 | - | |
Aip03g04774 | 1113 | Coils | Coil | 404 | 424 | - | - | |
Aip03g04774 | 1113 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 23 | 119 | - | - | |
Aip03g04774 | 1113 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 162 | 1026 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g04774 | Aip-Chr3 | 132023997 | 132029004 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g04774 | 2 | 1026 | Cell Wall Biosynthesis | AT5G17420 | 66.730 | 0.0 | 1404 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g04774 | K10999 | - | gmx:100781996 | 1719.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g04774 | 03 | 132023997 | 132029004 | Aip03g04774 | 03 | 132023997 | 132029004 | ECH |