Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04772 ATGGAGGCTGAAACTACTCTTGTCCCTCCCACGGCCACACCGCCACCACCTCATAATGGTGGTTTGGATTGGACAGTTGTAGCGGCGGCCATCGTGTGTGCCTTGCTGTGCGCTCTAGGGCTCAACACCATGCTACAATGCGTGTTTCAGTGTGCGGGGCGTGTTCTCACGCAGCCTCTTCAATGGATCGCTTCTCGAAGGCTCAATTCCGGTCTCAAGAGGAAGGACATGGTGGCTCTCCCTACCTCAACTTTTTCTTCTTCTTCTTCTTCTTCTGAAGCAGCTCCTAGTAACAATAATAATAACAACTGTGCAATATGCTTAGCAGAGTTCAGTGATGGTGAGCAAATAAGGTTTCTTCCGCAGTGCAGTCACCATTTTCACGTGGTTTGCATTGACAAGTGGCTCCTCTCTCATTCTTCTTGTCCTACTTGCAGGCACCTCCTCAAGTCTAATGCTGATTCTTCTTCGCTCCACTCTTTACATATTCTCTTAGCTTAA 501 0.485 MEAETTLVPPTATPPPPHNGGLDWTVVAAAIVCALLCALGLNTMLQCVFQCAGRVLTQPLQWIASRRLNSGLKRKDMVALPTSTFSSSSSSSEAAPSNNNNNNCAICLAEFSDGEQIRFLPQCSHHFHVVCIDKWLLSHSSCPTCRHLLKSNADSSSLHSLHILLA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04772 166 Pfam Ring finger domain 102 146 IPR001841 -
Aip03g04772 166 SMART ring_2 104 145 IPR001841 -
Aip03g04772 166 PANTHER OS06G0666500 PROTEIN 11 157 - -
Aip03g04772 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 152 IPR013083 -
Aip03g04772 166 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Aip03g04772 166 SUPERFAMILY RING/U-box 98 152 - -
Aip03g04772 166 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 11 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04772 Aip-Chr3 132017869 132018563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04772 11 149 C3H Transcription Factor Family AT2G17450 43.750 9.30e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04772 - K19040 gmx:100779286 211.075