Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04741 ATGGAAGTGGCGAAAACACGACATACACAACGGTGTGGAAGCAAGGACAGAGATGCAGCGTTAGAGAAGCGGCAAAACAAGTTCTCTAGCTCGGCGACGGTGCGACGTCACGAAGGGGAGAAGAAGGCGCGCAGCGACAGCGTCGCTTGTAGAGAGAACAGGGGCGGCGTGATGCATAGAAGAAGAAGGTGCAGCGGCAGCGTCGAGACTGGTCAACCAACCCGCCCCGCTTGGACATTGGATGCAGCAGCGGTGTTGGAGTCAATGTCATCCAGCTTGAGCGTAGAGACGTGGTGGCAGCACGTGACTGAGTATCTCCAACTCAGTAGANGCTTTGCATACTATACTCTTGGTGTAGCTGGCCACGGAACTTCTAGAGAGAGAAACCGCTTTTCGCTTCAACTCTCTCTCTCTTACATGGCCGATGAACCAATGCCCACTCGCTGGTCCTTCCAGGACTTCAAATTGAATTATGATGCGATGTTTGGGAGGAAGAAAGTGGTGGAGAATGGTGAGGCTGCTGATAAAGCTGTTGGTAATGGAAACTCATTGAACCATGCATCCAACGGCAATCTGCAAGCTAAAAGATCATCTGATATGACAATCTTTGAGCAGTTTCAGAGCCAGGGGCAGAATCCTGCGCAGACAAATGGCTTTTCACCAAACCATGGGGACGAAAGGCCGCAAAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAGATGCGTGCTTTAGCAGAGAGCTTAAGTAGGGATATAATTCGTGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGGTTAGGGAATGCCAAACTTTTGCTAAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCTCCATGGAAAGGCATTCTCCTTTTTGGCCCACCAGGGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGTGATTCCGAGAAGTTGATAAAGGTGTTATTTGAGCTTGCAAGACACCATGCCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAAAACTGAACTACTCATACAGATGGACGGTTTGGCCAAGACTGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCTATGCTCCGCCGTCTTGAGAAGCGAATCCTTGTACCACTCCCAGAACCAGAAGCAAGAAGATCCATGTTCGAGGAACTCCTTCCTCCGCAGCCTGATGAGGAAGAGATCCCCTATGATTTGCTAGTGGAGCGGACCGAAGGATATTCAGGGTCAGATATCCGGTTACTCTGCAAAGAGACAGCGATGCAGCCTTTGAGACGCCTAATGTCTCAACTTGAACAGAGACAAGAGGTGGTACCGGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGGTATGAAGATATAGAAGCAGCATTGAAAAACACAAGGCCATCTGCTCACCTGCATGCCCATAAATATGAAAAGTTTAATGCTGATTATGGCAGTCAAATACTTCACTGA 1629 0.477 MEVAKTRHTQRCGSKDRDAALEKRQNKFSSSATVRRHEGEKKARSDSVACRENRGGVMHRRRRCSGSVETGQPTRPAWTLDAAAVLESMSSSLSVETWWQHVTEYLQLSRXFAYYTLGVAGHGTSRERNRFSLQLSLSYMADEPMPTRWSFQDFKLNYDAMFGRKKVVENGEAADKAVGNGNSLNHASNGNLQAKRSSDMTIFEQFQSQGQNPAQTNGFSPNHGDERPQKSLLPPFESAEMRALAESLSRDIIRGSPNVKWESIKGLGNAKLLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECQTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLAKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRSMFEELLPPQPDEEEIPYDLLVERTEGYSGSDIRLLCKETAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRYEDIEAALKNTRPSAHLHAHKYEKFNADYGSQILH 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04741 542 CDD AAA 292 429 - -
Aip03g04741 542 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 144 540 - -
Aip03g04741 542 MobiDBLite consensus disorder prediction 1 47 - -
Aip03g04741 542 Gene3D - 257 533 IPR027417 -
Aip03g04741 542 Pfam ATPase family associated with various cellular activities (AAA) 298 428 IPR003959 GO:0005524|GO:0016887
Aip03g04741 542 Gene3D - 430 518 - -
Aip03g04741 542 PANTHER AAA DOMAIN-CONTAINING 144 540 - -
Aip03g04741 542 SMART AAA_5 294 431 IPR003593 -
Aip03g04741 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 525 IPR027417 -
Aip03g04741 542 MobiDBLite consensus disorder prediction 202 235 - -
Aip03g04741 542 MobiDBLite consensus disorder prediction 202 224 - -
Aip03g04741 542 Pfam AAA+ lid domain 455 491 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04741 Aip-Chr3 131599781 131611520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04741 292 501 Calmodulin-binding Proteins AT3G56690 35.681 5.72e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04741 K07767 - gmx:100794098 687.952