Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04726 ATGATGTTGCTTTCTCCTAAGATTAGTTTGAGTATAGTCATAGCCCTTTCCATTGTAACCATACTTTCATATGCAGATAATAATACTGGGCTCTTGGAGGTTGAAATTGAAGCCTTGAAAGCTTTCAAGAACTCCATCACCCTTGACCCAAATGGAACACTTGCTGATTGGATTGAAATCCACCCTCATTGCAATTGGTCTGGCATTCAATGTGACCCTTCTTCAAGCCATGTGATCTCAATTTCTCTGACTTCTCAGCAGCTCCATGGAGAGATTTCACCATTCTTGGGCAATATTTCAAGCCTTCAGGTTCTTGATTTAACTTCAAATTCATTTACCGGCTATATTCCTTATCAGCTAAGTCGTTGCACTCAACTCACTGTGCTTGGTCTCTTTGAGAATTCTCTCTCAGGACCAATCCCTCCTGAGTTAGGAAACTTGAAAAGTTTGCAGTATTTGGATTTTGGAAGTAACTTCTTGAATGGAACCCTTCCTGAGAGCATATTCAACATCACTTCTTTGTTGGGAATTGCTTTCAATAACAACAACCTCACAGGCACAATACCATCACATATAGGCAAGCTCCTTAACCTTATTCAGATGATAGGATATGGGAATAGCTTGGTTGGGTCTATACCTCCTTCAATAGGGAATCTTGAAGCTTTGAAGGCTCTTGATTTTAGCCAAAACCAGTTATCAGGTGTAATACCTAAAGAGATTGGAAACCTGACAAATTTACAATCCCTTGTCTTGTTTCAAAATTCATTGTCTGGTAAAATCCCTTCAGAACTTGCCAAGTGTAAGAATCTCTTAAACCTTGAGTTGTATGAAAATAACTTGTCTGGAAGTATTCCTCCTGAGCTAGGAAACTTATTTCATTTGGAAACATTGAGGATATTCAGCAATAACTTGAACTCCACTATTCCACCTTCCATATTCCAATTGAAATCATTGACACATTTAGGCCTCTCAAACAATAACTTGGAGGGAACAATATCTCCTGAGATAGGATCTTTGAGTTCCTTAACATACCTAACCCTGCATCTAAATAAGTTTACCGGCCGCATCCCTTCATCGATAACAAGCTTGAAAAACTTAACATATCTTTCAATGAGCCAGAATCTTCTTTCAGGTGAAATTCCTTCAGACATTGGTGTGCTTCATAATTTGAAGTTTCTAATCTTGGGCTTCAACCATTTACATGGTTCCATCCCTCCTAGCATTACCAGTTGTACTAGCTTGGTAAATGTAAGTTTAGCTTTCAATTCATTCACTGGCAAAATTCCTGAGGGCTTTTCTAGGATGCCTAATCTTACTTTCCTATCTTTTGCCCACAACAACTTTTCCGGGGAAATCCCGGACGACCTTTTCAACTGCTCAAACCTTCATACACTAAGTTTGGGAGAGAACAATATGAGTGGAGTAATAAAACCAGGCATTCAAAACCTGTTTAAGGTTCAGACTCTGCAGCTGAATGTAAATTCCTTCATAGGATCAATTCCACCAGAGATTGGAAACTTAAGTCAGCTCATCACTTTAACCCTTGCTGAAAACAAGTTATCTGGTTCAATTCCACCAGAATTGTCCAAACTTTTTCTTCTGCAGGGGCTCTCCCTCCATGACAATGAGTTAGAAGGTACAATACCTGATACACTCTCTGGTATCAAACCACTAACAAAGCTTTTGCTGCATAGAAACAAGTTGGTTGGTCAGATACCAGATTCTATCTCACAGCTTGATATGCTTTCACATTTGGATCTCCATGACAACAAGCTGAATGGTTCCATTCCAAGAAGCATGGGGAAGCTTAATAAGCTTTTGATGTTGGATCTCTCTCACAACCACCTCACAGGATCAATTCCTAGTGATGTCATTGCACACTTCAAAGACATGCAGATGTATCTCAACCTTTCTTACAACAACTTTGCTGGAAGTGTTCCAGATGAGTTGGGCATGTTGCAAATGGTACAGGCCAttgatatttcaaacaataatctttcaggtgtcattcccatgagaatttccgggtgcagaaatctgttcaatcttgatttttcaggaaacaagatttcaggcccaattcctgcagaaggttttagtcacttggacttgcttgaaaacttgaatctttcaagaaaccatttagatggtaaaatccctgaagtcttggcacaacttgagcatctcatttcagtagatctttctcaaaataacttgaagggaacaattCCTCAGGGCTTTGCCAATCTCTCCAAGCTGATGCATCTCAACCTTTCTTTCAATCAACTTGAAGGCCCTGTGCCTATGACTGGAATATTTGCACATATCGATGCATCTGATATGAAGGGAAACCAGGATCTTTGTGGAGCAAAATTCTTAAGGCCATGCAAAGAAGGTAATAATCATGCTCTATCCAAGAGGAGCATAGCTATTATCGCTGCGCTTGGATCTCTTGCAATACTCCTACTTCTAGTGCTTGTGATTTTGATTCTCAATCGAGGCAACAAACTTTGCAATTCTAAACAAAAAGAGAGTGGTGAGAATCAAGAACCAGATTACAGGACAGCATTGGCTCTTAAAAGATTCAGTCCAAGGGAGCTAGAGAATGCCACTGGCTTATTCAGCACTGACAACATCATTGGTGCTAGCAATTTGAGCACAGTTTACAAGGGCCAACTTGAACAAGGCCAGATTGTAGCTGTCAAAAGATTGAATTTGCATCAATTCTATGCAAATACAGATAAGATCTTCAAAACAGAAGCCAGCACCTTGAGCCAGCTGAGGCATAGAAATTTGGTGAAGGTGCTTGGTTATGCCTGGGAGAGTGGGAAATTGAAAGCTCTAGTTCTAGAGTACATGGAAAATGGGAATTTGGATACCATCATACATGACAAATCGGTCGATCAGTCTAGGTGGACATTATCTGAAAGAATCCGTGTTCTGATTTCTATTGCTAGCGGATTGGACTACTTACACTCTGGTTATGACTTTCCCATTGTGCACTGTGACTTAAAACCTTCTAACATCCTTTTGGATAGAGACTGGGAAGCTCATGTCAGTGATTTTGGAACAGCTCGAATTCTCGGACTTCATTTGCAGGATGGTAATACCCTTTCCTCATCTGCAGCTTTGCAAGGCACAGTTGGCTATCTTGCACCAGAAATTGCCTACATAAGGAAAGTTACAACTAAAGTGGACGTGTTCAGCTTTGGCATCATTGTAATGGAGTTTCTAACAAAAAGAAGGCCAACAGGGCTCTCAGAAGAGGATGATGGCCTGCCAGTAAGTCTACCTGAGGCAGTAGAAAAAGCCGTCGCGAACGGAATGAAGGAGCTCATTAATATTGTAGACCCTATGCTGGCCATGGATGACACAAAAGGCCATGTTGATGTATTGGTAGGACTCTTCAAGTTATCCTTGTGTTGTACTCTCCCCAATCCTGAAGATCGACCTAACATGAATGAGGTGTTATCTACTCTTATGAAGCTTCAAACAGCAAGTTAA 3504 0.3779 MMLLSPKISLSIVIALSIVTILSYADNNTGLLEVEIEALKAFKNSITLDPNGTLADWIEIHPHCNWSGIQCDPSSSHVISISLTSQQLHGEISPFLGNISSLQVLDLTSNSFTGYIPYQLSRCTQLTVLGLFENSLSGPIPPELGNLKSLQYLDFGSNFLNGTLPESIFNITSLLGIAFNNNNLTGTIPSHIGKLLNLIQMIGYGNSLVGSIPPSIGNLEALKALDFSQNQLSGVIPKEIGNLTNLQSLVLFQNSLSGKIPSELAKCKNLLNLELYENNLSGSIPPELGNLFHLETLRIFSNNLNSTIPPSIFQLKSLTHLGLSNNNLEGTISPEIGSLSSLTYLTLHLNKFTGRIPSSITSLKNLTYLSMSQNLLSGEIPSDIGVLHNLKFLILGFNHLHGSIPPSITSCTSLVNVSLAFNSFTGKIPEGFSRMPNLTFLSFAHNNFSGEIPDDLFNCSNLHTLSLGENNMSGVIKPGIQNLFKVQTLQLNVNSFIGSIPPEIGNLSQLITLTLAENKLSGSIPPELSKLFLLQGLSLHDNELEGTIPDTLSGIKPLTKLLLHRNKLVGQIPDSISQLDMLSHLDLHDNKLNGSIPRSMGKLNKLLMLDLSHNHLTGSIPSDVIAHFKDMQMYLNLSYNNFAGSVPDELGMLQMVQAIDISNNNLSGVIPMRISGCRNLFNLDFSGNKISGPIPAEGFSHLDLLENLNLSRNHLDGKIPEVLAQLEHLISVDLSQNNLKGTIPQGFANLSKLMHLNLSFNQLEGPVPMTGIFAHIDASDMKGNQDLCGAKFLRPCKEGNNHALSKRSIAIIAALGSLAILLLLVLVILILNRGNKLCNSKQKESGENQEPDYRTALALKRFSPRELENATGLFSTDNIIGASNLSTVYKGQLEQGQIVAVKRLNLHQFYANTDKIFKTEASTLSQLRHRNLVKVLGYAWESGKLKALVLEYMENGNLDTIIHDKSVDQSRWTLSERIRVLISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLQDGNTLSSSAALQGTVGYLAPEIAYIRKVTTKVDVFSFGIIVMEFLTKRRPTGLSEEDDGLPVSLPEAVEKAVANGMKELINIVDPMLAMDDTKGHVDVLVGLFKLSLCCTLPNPEDRPNMNEVLSTLMKLQTAS 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04726 1167 SMART LRR_sd22_2 387 419 - -
Aip03g04726 1167 SMART LRR_sd22_2 147 173 - -
Aip03g04726 1167 SMART LRR_sd22_2 219 245 - -
Aip03g04726 1167 SMART LRR_sd22_2 363 386 - -
Aip03g04726 1167 SMART LRR_sd22_2 677 710 - -
Aip03g04726 1167 SMART LRR_typ_2 99 123 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 579 602 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 507 531 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 291 315 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 726 749 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 603 627 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 702 725 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 750 775 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 243 267 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 219 242 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 147 171 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 387 411 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 435 459 IPR003591 -
Aip03g04726 1167 SMART LRR_typ_2 339 363 IPR003591 -
Aip03g04726 1167 Pfam Leucine rich repeat 558 616 IPR001611 GO:0005515
Aip03g04726 1167 Pfam Leucine rich repeat 705 763 IPR001611 GO:0005515
Aip03g04726 1167 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Aip03g04726 1167 SUPERFAMILY Protein kinase-like (PK-like) 853 1161 IPR011009 -
Aip03g04726 1167 Gene3D Ribonuclease Inhibitor 203 361 IPR032675 -
Aip03g04726 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 369 1163 - -
Aip03g04726 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 168 302 - -
Aip03g04726 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 117 168 - -
Aip03g04726 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 305 370 - -
Aip03g04726 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 5 120 - -
Aip03g04726 1167 Gene3D Phosphorylase Kinase; domain 1 835 952 - -
Aip03g04726 1167 CDD STKc_IRAK 880 1163 - -
Aip03g04726 1167 SUPERFAMILY L domain-like 603 693 - -
Aip03g04726 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Aip03g04726 1167 SUPERFAMILY RNI-like 77 377 - -
Aip03g04726 1167 SMART serkin_6 874 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04726 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 369 1163 - -
Aip03g04726 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 120 - -
Aip03g04726 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 305 370 - -
Aip03g04726 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 168 302 - -
Aip03g04726 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 117 168 - -
Aip03g04726 1167 Pfam Protein kinase domain 875 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04726 1167 Gene3D Transferase(Phosphotransferase) domain 1 953 1166 - -
Aip03g04726 1167 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Aip03g04726 1167 Gene3D Ribonuclease Inhibitor 365 629 IPR032675 -
Aip03g04726 1167 Gene3D Ribonuclease Inhibitor 630 804 IPR032675 -
Aip03g04726 1167 ProSiteProfiles Protein kinase domain profile. 874 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04726 1167 SUPERFAMILY RNI-like 320 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04726 Aip-Chr3 131491734 131495603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04726 32 1164 Receptor kinase-like Gene Family AT5G46330 53.678 0.0 1120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip03g04726 Pkinase 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04726 K13420 - gmx:100817960 1707.96