Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04725 ATGCGAAGAATTCAAGGAGAAGAAACGGAGGGAGTGACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCCGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCGGCACAGCTTCAATTTCCTGATTCCATGCCCGTATCAGAGAAGAAGGAAAGAGCTGATGTAACTCTCAGGGAAATGGGTCTGCAAAACGCCATTCACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCTGCTTCTGATGCTAATCAGCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGTTAGTATCCTTGTGAAGTCTTATAGCTTGTCTCAGATTAAGAACAAAGTTTATACAGAAGTGGCAAACATAAATCAACGTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTATTGTGTTTATTGCAATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGTTCCGGGATTAATATCCTATTACCTTTGTGGATTCCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTATGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCCTATGGAAATATCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTGAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGGTAAGAATAACATAAACATTAGTGGTGGGGAGATTCTAATAAAGACATGGCACGTGGAAATGGGACACTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGAGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1872 0.4124 MRRIQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPVSEKKERADVTLREMGLQNAIHTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQQFFALNGFPCPTLHNPSDHYLRIINKDFEQEAEEGFGSRVTAEKAVSILVKSYSLSQIKNKVYTEVANINQRDFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLIVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLVPGLISYYLCGFQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNYVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFEGLTFMMGQDGGGKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKEKLRPASICCFH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04725 623 Pfam ABC transporter 34 184 IPR003439 GO:0005524
Aip03g04725 623 Gene3D - 12 309 IPR027417 -
Aip03g04725 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 249 IPR027417 -
Aip03g04725 623 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 4 616 - -
Aip03g04725 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 616 - -
Aip03g04725 623 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524
Aip03g04725 623 CDD ABCG_EPDR 11 241 - -
Aip03g04725 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Aip03g04725 623 Pfam ABC-2 type transporter 337 549 IPR013525 GO:0016020|GO:0140359
Aip03g04725 623 SMART AAA_5 42 235 IPR003593 -
Aip03g04725 623 Pfam ABC-2 type transporter 216 285 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04725 Aip-Chr3 131461799 131464667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04725 30 244 Calmodulin-binding Proteins AT2G36910 24.324 6.89e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04725 K05681 - gmx:100792425 930.243