Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04700 ATGTTTCTCTTAGTTTCTGGTTTGCTGACCAATATCTTGAACAGGGTAGATTCCGCTACCTACAAAGAGATTTCACTGTTATGGGGTCTTAAAGATGAAATTGACACCCTCAAGAACTCTCTCAGAATCATCAATGCTTTCCTTGTGGATGCTGAGAACAAGCAAACACAAAATAACGGCATCATGGAGTGGCTGCAGCAGCTCAGGGATCATTTCTTCGATGCTCGTGACATCTTGGATGAGATTGAGTGTGAAGCACTCAGGAACAAGATTGTCAAGAGCCAAGGAAGCTTCAAAAGAAAGGTAAAGCGCTTCTTCTCACTCTCTAACCCTCTTGCATTTCGTATTCAGATGGCTCATAAGATCAAGGAAATTAAGAAAAAAATAGATGAATTGGCTTCTTTTAGGATGAAACTTGGTCTCTCGGAGATTCATGCAAGTAGTAGTGATGTTCATGTTCCAAAGTTGGCTTGGAGGGAGACTAAATCTTATGTTAGGCCTTCCCATGTGATTGGTAGAGATCAGGAGAAAGAGAAGATCATTGGTTTATTGACCGTTCCATCATCAgattctggtaatgagattattgatgttattccaattgttggaattggaggtttggggaagaccacaattgcacaactagtgtacaatgatgatagggtgatcgagaatttctttccacgaatgtgggtgtttgtctctgatgattttgatgttAAGAGGTTGGCATTGGAGATTCTTAAGGCTATGCATGGAATAGATATAGATGCCCATCACAATTATAGTTATGATCAGTTACAGAATTTGCTGCACGAGGGACTAgatgggaagaagtttctgcttgttctcgacgacgtttggaatgaagattatagagggtgggacgaactgagaaatctgttagtaggaatgcacgatgatgaaaataacagaattggtagcaagattatcgtgacaactcgtagcgaaaaggttgcttcgatcatggggaaagcttataaacagaacctgctatatcttcctgatgaagattgtctaaagctatttctcaggtgtgcatttccggcaggagaggaaaacaagcacccgaggcttgtggaaattgggaaagagattgttagaaagtgcaaagggttgcccctggcagtggtgagtttagggtgcatgcttcactcagaaaatcgagaaagtgtgtggaagaaaactagagatagtgaaatttggaaaatggaccaacaaaatgatgggattttggctgcattgaaactgagctataaccacttgccatctgaattgaaaaggtgtttctcctattgttcagtttttccgaagggttatgaatatagcaatttggagttgatatcattttggatggcACATGGACTGCTACAAACCAACGACGAAGATGAAGAGGCAGAGGATCTTGGAGAGTTCTATATTCAAGAGCTAGTTTCAAAATCTTTCTTTGAAGGTGTTCCTGAAGATCAAGTAGTTGTTGATGGACTTATTTTTGAAGAACTTAAGCATCTAGGAATATCTTATTTTAAGATGCATGATCTTATTAATGACCTTGCTGTGTCTACTATGCAAAATGAAAGGGCTGCAGTAAAGTTTAATTCAACCAATGTGAGAGAAAATGTGCAGCATTTATCATTTTCTGATAGTAGAGAAGGAGTACCTAATTTTGGTAATAAAAGGTTGAGTAAGGTCCAAACCATTGGATTCTGGCATGCAAGTGAAAGTGCAAGTGCAATCACTGAACCATTTCTTAGATGGGTTTTTAAGGAATTCAGGTACCTCAGGGTGTTGAATTTACAATGTTCAAATTTTCAGTTCTTGCCTGATTGTTTCAACAAGATGAAGCATTTGAGGTATCTTAATCTGAGCTATTGCCAAAGGATGGAAAAACTCCCAGATTCCATTTGCAAGCTGCAGAACTTGGAAGTTCTTAATCTGTGTAGATGTGTAGCACTTAAATACATTCCAAAAAACTTGAGGTATCTTGTGAGCCTCAGGATTTTGTGGATCACCACACAAATGAATGATTTGTCTTGTATAGGTTTTAAGACCTTCAGTTCTTTGCAAATATTGATTTTGTGGAATTGTGAAAACTTAACATTCCTTCCACATGATTTGAGACACTTAACTGCTTTGAAAAGGCTTAGTATTGAGGCTTGTCTTGAGGTGACTCATTTTGGAGATGAAGCTGAACAAGAAATTGATGACGACTATTCCTTGAAACTTGAACAATTCTCAATCAACCAACTACCAGAATTGTTAGCATTACCTAATTGGCTAAGAAGATGTTCTAAGACTCTCAGATATCTGGGCCTTTCACAGTGTCAGAGCTTAACAGCATTTCCAGAATGGTTCCCAGTTCTGACATCACTTGAAACCCTTCTAATTGCTGATTGTCCAAAATTAACACTACCACATAATATGGATAATGTTCATAACCTTCAGAACTTGAAGATATTTGGATGCCCTCAGCTAGTTGAGAGATGCAAAAGAGATATAGGACCTGATTGGTGTAAAATATCTCATATCCCAAATATTGAACTTGAAAGCGTTTAA 2577 0.2759 MFLLVSGLLTNILNRVDSATYKEISLLWGLKDEIDTLKNSLRIINAFLVDAENKQTQNNGIMEWLQQLRDHFFDARDILDEIECEALRNKIVKSQGSFKRKVKRFFSLSNPLAFRIQMAHKIKEIKKKIDELASFRMKLGLSEIHASSSDVHVPKLAWRETKSYVRPSHVIGRDQEKEKIIGLLTVPSSDSGNEIIDVIPIVGIGGLGKTTIAQLVYNDDRVIENFFPRMWVFVSDDFDVKRLALEILKAMHGIDIDAHHNYSYDQLQNLLHEGLDGKKFLLVLDDVWNEDYRGWDELRNLLVGMHDDENNRIGSKIIVTTRSEKVASIMGKAYKQNLLYLPDEDCLKLFLRCAFPAGEENKHPRLVEIGKEIVRKCKGLPLAVVSLGCMLHSENRESVWKKTRDSEIWKMDQQNDGILAALKLSYNHLPSELKRCFSYCSVFPKGYEYSNLELISFWMAHGLLQTNDEDEEAEDLGEFYIQELVSKSFFEGVPEDQVVVDGLIFEELKHLGISYFKMHDLINDLAVSTMQNERAAVKFNSTNVRENVQHLSFSDSREGVPNFGNKRLSKVQTIGFWHASESASAITEPFLRWVFKEFRYLRVLNLQCSNFQFLPDCFNKMKHLRYLNLSYCQRMEKLPDSICKLQNLEVLNLCRCVALKYIPKNLRYLVSLRILWITTQMNDLSCIGFKTFSSLQILILWNCENLTFLPHDLRHLTALKRLSIEACLEVTHFGDEAEQEIDDDYSLKLEQFSINQLPELLALPNWLRRCSKTLRYLGLSQCQSLTAFPEWFPVLTSLETLLIADCPKLTLPHNMDNVHNLQNLKIFGCPQLVERCKRDIGPDWCKISHIPNIELESV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04700 858 Gene3D Ribonuclease Inhibitor 746 840 IPR032675 -
Aip03g04700 858 CDD RX-CC_like 5 82 IPR038005 -
Aip03g04700 858 Pfam Rx N-terminal domain 9 97 IPR041118 -
Aip03g04700 858 Gene3D - 340 430 IPR042197 -
Aip03g04700 858 PANTHER OS08G0543100 PROTEIN 4 836 - -
Aip03g04700 858 Gene3D Ribonuclease Inhibitor 504 739 IPR032675 -
Aip03g04700 858 Gene3D - 9 123 - -
Aip03g04700 858 SUPERFAMILY L domain-like 517 849 - -
Aip03g04700 858 PANTHER DISEASE RESISTANCE PROTEIN RP 4 836 IPR044974 GO:0006952
Aip03g04700 858 PRINTS Disease resistance protein signature 198 213 - -
Aip03g04700 858 PRINTS Disease resistance protein signature 274 288 - -
Aip03g04700 858 PRINTS Disease resistance protein signature 377 391 - -
Aip03g04700 858 PRINTS Disease resistance protein signature 619 635 - -
Aip03g04700 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Aip03g04700 858 Pfam NB-ARC domain 175 427 IPR002182 GO:0043531
Aip03g04700 858 Gene3D - 158 336 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04700 Aip-Chr3 131269513 131272402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04700 196 832 WRKY Transcription Factor Family AT5G45050 22.270 2.60e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04700 - - cam:101500245 1183.7