Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04693 ATGGAAAAGGAGCCTTTGCTCCCATACTTTAGCCCAAGAAAGAGGCAATCACCATTATCAAACCAGCTTTCTCCATTGCCGGAACATGATGAGGTTCTTCTTCCCGCTTCCCCTGCCTGGATCAAAGACCGACTCATCTTTGGCCCTTCGCCTCTTGGTTCTTCCCCTAGCGATTCTTCACCTTTGATTGAGGCCTTGGCACTTTCACAACCACAACAACCTTCTTCTCCTTGTCCTTCCTCTTCTTCACAGGACTTTGCATCAGCACTTCTTGAATCACCACACTTTAACCAACAACAGCAACAATCTTCTTGGCTTATTGATCCCAATTATCCATGGCGCAAGTCCAATCTTCACCGCTCCAAAACTGCACCGGCTATGGCTGTGATCAGCGATTTCAACAATTGTAGTGCCCCCCAAAAGCCGCAAATTAGTAGCCAGTCAATTATTCATCAGGCTTTTCTCCTTCTTGTTCTTTATTTGGCATTAGGGGTAGTCATTTATTGGTTCAATCGTCATAGTTTTACAGTTTCTGAGACTCATCCCATAGTTGATGCATTGTATTTCTGTATAGTTACAATGTGCACAATTGGATATGGAGACATCACACCAAATAGTACCATAACCAAGCTTTTCGCGATATTCTTTGTGTTGATTGGTTTTGGTTTTATAGACATATTGCTCAGTGGGATGGTTAGCTATGTACTGGATTTGCAGGAGAATCATTTGTTGAGGACAGTGAAGAGTAGGGGCGAAAAGGATGCGAGGTCTTATATAATCGATGTGAAGAAAGGGAGGATGAGAATTAGAATGAAGGTGGCATTGGCAGGACTAGTTGTTGTGTTTTGTATTGGAGTTGGTGTGGCAGTTTTGCATTTTGTGGAGAAGCTCAGCTGGCTGGATTCCTTTTATCTTTCTGTTATGTCAGTTACAACTGTTGGCTACGGCGATCACTCATTCAGTACTATGCATGGTCGCATCTTCGCCGCCATTTGGTTGCTTGTGTCTACACTTGCAGTTGCACGAGCATTCCTATATTTGGCCGAAGCAAGAGTTGATAAGCGACACAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCAGATATGGACAACAATGGTTTTGTGAGTAAATCTGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCGGAGAAGGACATTATGCAGATCAGTGAGAAGTTCGATAGACTGGATACTGGGAATTGTGGAAAAATAACACTTGCTGATCTCATGGATGCTCGAAATTGA 1302 0.4309 MEKEPLLPYFSPRKRQSPLSNQLSPLPEHDEVLLPASPAWIKDRLIFGPSPLGSSPSDSSPLIEALALSQPQQPSSPCPSSSSQDFASALLESPHFNQQQQQSSWLIDPNYPWRKSNLHRSKTAPAMAVISDFNNCSAPQKPQISSQSIIHQAFLLLVLYLALGVVIYWFNRHSFTVSETHPIVDALYFCIVTMCTIGYGDITPNSTITKLFAIFFVLIGFGFIDILLSGMVSYVLDLQENHLLRTVKSRGEKDARSYIIDVKKGRMRIRMKVALAGLVVVFCIGVGVAVLHFVEKLSWLDSFYLSVMSVTTVGYGDHSFSTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADMDNNGFVSKSEYVIYKLKEMGKVSEKDIMQISEKFDRLDTGNCGKITLADLMDARN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04693 433 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Aip03g04693 433 Gene3D - 340 433 - -
Aip03g04693 433 PRINTS Two pore domain K+ channel signature 192 220 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aip03g04693 433 PRINTS Two pore domain K+ channel signature 311 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aip03g04693 433 SUPERFAMILY Voltage-gated potassium channels 263 370 - -
Aip03g04693 433 SUPERFAMILY EF-hand 368 430 IPR011992 -
Aip03g04693 433 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 98 428 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aip03g04693 433 MobiDBLite consensus disorder prediction 1 26 - -
Aip03g04693 433 Pfam Ion channel 156 235 IPR013099 -
Aip03g04693 433 Pfam Ion channel 278 348 IPR013099 -
Aip03g04693 433 Gene3D - 146 248 - -
Aip03g04693 433 Gene3D - 278 339 - -
Aip03g04693 433 SUPERFAMILY Voltage-gated potassium channels 146 235 - -
Aip03g04693 433 PANTHER TWO-PORE POTASSIUM CHANNEL 3 98 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04693 Aip-Chr3 131191082 131195117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04693 4 431 Ion Channels AT4G18160 58.716 9.33e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04693 K05389 - gmx:100804249 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04693 03 131191082 131195117 Aip03g04693 03 131191082 131195117 ECH