Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04691 ATGTCTGATGAAGCTAAACAACTTCTCTACCAAGACCTTATTCTTGATCATCATCAGAATCAGAATATTATTGCAGGAGGAGGAAGATTATCCAACAACATGTTCTGTGAGAAGCAGTTTCCATCATCATCATCATCATCACAAGTAGCGTTTGATCCATCTTCATACATGAGCTTCACTGAATGCCTTCAAGGAGGGATGGACTATAACTCGCTTGCAACTTCTTTTGGTTTGTCTCCTTCTTCATCGGAGGTCTTTTCATCCATCGAAGGCAACAATAATAATCAAAAGCTCGAAGGTGATGTATTAGGAACTGGTGGCGGTGGTGGAGGTAGTGAAACCCTTGCAACCCTGAACTCATCGATCTCTTCGTCATCATCTGAAGCCGGGGGCGAAGAAGATTCTGGAAAGAGCAACAAAGATAGCCAGGTCAAAGAAGAAGCAGCAGGAGAAACCTCTAAGAAGGGGAACAAGGAGAATAATAATAATAAGAAGAAAGGGGAGAAGAAGCAGAAGGAGCCAAGGTTTGCGTTCATGACAAAGAGCGAGGTTGATCATCTTGAAGATGGATACCGATGGAGAAAATACGGACAGAAAGCCGTTAAGAATAGCCCTTATCCAAGGAGTTACTACAGATGCACGACACAGAAGTGCAGCGTGAAGAAACGCGTGGAGAGGTGTTATCAGGATCCAACGACTGTGATAACAACCTATGAAGGTCAACACAACCATCCAGTCCCCACTTCTTTGAGAGGGAATGCGGCTTCAATGTTCACACCTTCCATGCTCTCCATCTCCGCCCCCACTCCCCTCCTCTCATCCGCCGCACATCACGACCTCGCCCTTTTTGCTCCCCTTTCCCACCACCACAACCAATATTCCGCTGCTTCTGGATCATTGTTTCATCACCATCAGAGCATTAACAACAACTTTAATAACAACAACAATAATAATAATAATAACTCTCTTCTTCTTCTCAATCATCATCATCATCCGTATAATAATCAGCAGCTTCCTCCTGAATATGGCCTCCTTCAAGACATGCTCCCTTCCATGTTCCTCAAGCAAGAGCCATGA 1077 0.4438 MSDEAKQLLYQDLILDHHQNQNIIAGGGRLSNNMFCEKQFPSSSSSSQVAFDPSSYMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSIEGNNNNQKLEGDVLGTGGGGGGSETLATLNSSISSSSSEAGGEEDSGKSNKDSQVKEEAAGETSKKGNKENNNNKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCSVKKRVERCYQDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSMLSISAPTPLLSSAAHHDLALFAPLSHHHNQYSAASGSLFHHHQSINNNFNNNNNNNNNNSLLLLNHHHHPYNNQQLPPEYGLLQDMLPSMFLKQEP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04691 358 Gene3D WRKY domain 171 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g04691 358 SUPERFAMILY WRKY DNA-binding domain 179 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g04691 358 Pfam WRKY DNA -binding domain 188 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04691 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 311 IPR044810 GO:0003700
Aip03g04691 358 PANTHER WRKY TRANSCRIPTION FACTOR 81 1 311 - -
Aip03g04691 358 MobiDBLite consensus disorder prediction 112 132 - -
Aip03g04691 358 ProSiteProfiles WRKY domain profile. 182 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04691 358 SMART WRKY_cls 187 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04691 358 MobiDBLite consensus disorder prediction 83 175 - -
Aip03g04691 358 MobiDBLite consensus disorder prediction 133 175 - -
Aip03g04691 358 MobiDBLite consensus disorder prediction 83 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04691 Aip-Chr3 131159970 131161633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04691 47 358 WRKY Transcription Factor Family AT4G18170 47.352 4.90e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g04691 WRKY 7.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04691 - - gmx:100816891 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04691 03 131159970 131161633 Aip03g04691 03 131159970 131161633 ECH