Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04685 ATGGCAGCCTCCACCATGGCTCTCTCCTCCCCATCATTGGCCGGCAAGGCCGTCAAGCTCAGCCCATCAGCCCCTGAGCTTGGAGTTGGAAGAATCTCCATGAGGAAAACCGCCACCAAGCAAGCAACTTCAGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGCCCCCGTCCTACCTCACTGGTGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCCGCTGACCCAGAGACCTTTGCCAGGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGGGCTTTGGGCTGTGTCTTCCCAGAGCTTTTGGCCCGCAACGGTGTTAAATTCGGAGAGGCTGTGTGGTTCAAGGCCGGATCACAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTAATCCACGCACAGAGCATCTTGGCCATTTGGGCCACCCAGGTCATCTTGATGGGAGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGAGAGGTTACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCCGACGACCCAGAGGCTTTCGCCGAGCTCAAGGTCAAGGAGATTAAGAACGGTAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCTATTGTCACTGGAAAGGGCCCATTGGAGAACCTCGCTGACCACCTTGCTGACCCAGTCAACAACAACGCCTGGGCCTATGCCACCAACTTTGTCCCCGGAAAGTGA 795 0.5711 MAASTMALSSPSLAGKAVKLSPSAPELGVGRISMRKTATKQATSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04685 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Aip03g04685 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Aip03g04685 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Aip03g04685 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Aip03g04685 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04685 Aip-Chr3 131108575 131109369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04685 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 90.226 8.58e-176 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04685 K08912 - qsu:112030611 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04685 03 131108575 131109369 Aip03g04685 03 131108575 131109369 ECH