Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04657 ATGGGTCAGAAATTTTCTCATGAAGGGGTTAATAGTGAGCATATACCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGATGAAGTTAACGAGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTATCATGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATTAGGGACGAAGATATATGTCATTTTCACTTTTCTGATGTCAACATTGCGTTTGAGTTCTACAATAGATATGTAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGAAAGAGTCGTGCGGACGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAAACCACAAAATAATAATGGCATTGGAAATTTTAAGAAAAAACCTACACCAGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAGTCATTCGCTTCTAGATCCTCGGTTGATTGGATTGCTTCATGGGCATAGATTCATGTCTGAGGCTGATATTTGCCACATGATTAACATGGAAAAGGGTGAGATTAGTGTTGGGCAGATATATCGAGCATTAGCAAATTGGGCACGTGGCTACGGGTATCTCTTTTTCATACAAAGGGACATATACAATAAAATAGCAAAGCAGAGGCACCAGTTACCTAGTGATGCGTATGCAGATTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACGTGGATGCTGATGGTACTTTGCGCAATTTATTTTGGTGCGATAGTCTCAGTAGGGCAGATTACTCATTATTTGATGATGTGCTGGCTTTTGATGCTACCTATAAGAGGAATAAATATGTGTCCATTGGTGACACATGTAGGTGGTTGCTACAACAATTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTTATCACGGATGGTGATCTATCAATGAAGTTCGTCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTTGCAATGCAACAAGTAATATTGGCAAGCCCCAGTTTACCTCCATGTTTAAAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTTGTCAAAAGTGGTTTGAAATGATTGAGGAATTTTGTGTCGAAAACAAGAGTTGGGTCCTAGATATGTATAAGAAGAGACATTCATGGTCAACTGCACATATAAGAGGGAAGTTTTTTGCTGATTTTCGGACTACTTCTCAATGCGAGGGATTAAACTCAATCATTGCAAAGTATGTCAATTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGATGTGTCGACCATATTCGGTAG 1428 0.3873 MGQKFSHEGVNSEHIPYDQYEQEEEKHDEVNEDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDICHFHFSDVNIAFEFYNRYVRTRGFSARKNRTRKSRADVLKLKNFVCHREGFKPQNNNGIGNFKKKPTPETRCGCSAMMEIRLDAPSGRWFISYFSDEHSHSLLDPRLIGLLHGHRFMSEADICHMINMEKGEISVGQIYRALANWARGYGYLFFIQRDIYNKIAKQRHQLPSDAYADLKYLEDQATNDPSLYFNHHVDADGTLRNLFWCDSLSRADYSLFDDVLAFDATYKRNKYVSIGDTCRWLLQQLKVAMNGKAPVSVITDGDLSMKFVIEKEFPNAHHRLCAWHLICNATSNIGKPQFTSMFKKCMLGDYEIDVFCQKWFEMIEEFCVENKSWVLDMYKKRHSWSTAHIRGKFFADFRTTSQCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04657 475 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Aip03g04657 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 317 470 IPR031052 GO:0006355
Aip03g04657 475 Pfam MULE transposase domain 319 366 IPR018289 -
Aip03g04657 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 311 IPR031052 GO:0006355
Aip03g04657 475 MobiDBLite consensus disorder prediction 1 26 - -
Aip03g04657 475 PANTHER OS02G0262500 PROTEIN 75 311 - -
Aip03g04657 475 Coils Coil 17 40 - -
Aip03g04657 475 PANTHER OS02G0262500 PROTEIN 317 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04657 Aip-Chr3 130799024 130800524 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g04657 FAR1 5.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04657 - - ahf:112723376 871.307