Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04656 ATGGAGTCCATCTGGAAGATCAGAAGCAAGACCAGCAGCAACAGGAAGCCCAGGCTAGAGCGCCTCAACGCCAGAAAGAACATCAATTACAATCCACCCGCAAATCCTCATTCGCCACCTTCTTCCTCCTCCTCTTCCTCTTCTCTCCACCACCAAACTAGCTTTAGGGTCACCGACGGCGATTTCGACCTAATCTTCCAAAGCCTGGGCCTTTCTGGCCCCGAAGATTTTTCCATCCCAACTGCAGATTGGGAAGCCAGGAAGGTTCGCTTTGCTTCTCATACTTCTAATGCTGCCGCTGAGCCCAAGGAGGATCGAAATTCAGCTGAAGTGAAATCTGGGGTTTTTCTTGATTCGGATTCCCAGCTTAAAAATGACAACTTTTCGAGACCCGTTGAAGTGGGAGGCTCCAAGTTTGGTGTTTCTTCAGATGTGAAGGTTTTGGGTGGTAAAAATGGAGATGGGGCTGGCGGGGGAGGGATCAAGGGTGCCAGGCCTCCGCTCTTGAGGCCAATTGTTGTTGATGCGGTTGGTTCGAATTGGGAATTAAAGAGGTCCTTTGGTCTCCAAGATAATTTTGTTGGTATTGGAGTTGTTGGTGATTCGCCTTCGTCTTCTGGTGAAATCGGCGTTGTTGGTAGGGTGAGAAATGGGGAAAGAAGCATGCTTTTTACGGATTCAGGTTCCTTTACTACATCCCATGATGATGATAGTGATATTGGCGGGGAAAGAGCTTGTTCTTCTTCTGGTTCTGGCGCGGTTGATGGTTCCTTAATTGAGTGGTTTAACCGAACTTTCTCGTCGTGGCAAAAAGGTGACGTTTTGGGAAAGGGGTCGTTTGGAACCGTCTATGAAGGTTTTACAGATGATGGATTCTTTTTTGCGGTGAAGGAGGCATCTTTGCTGGATGAAGGTAGTAACCAGGGTAAACAGAGCGTATTCCAACTTCGGCAGGAAATATCTCTTTTGAGTCGGTTTCAACACGAGAATATAGTTCGATATTTTGGCACTCAAGAGGACCAAAGTTCACTTTATATCTTCCTTGAACTTGTGCCTAAAGGGTCATTGTTAAGTCTCTATCAGAAGTATAGCTTAAATGATTCTCACGTTTCTGCATACACAAGGCAGATTTTGCATGGCTTGAAATATCTTCACAATCAAAATGTGGTTCACAGGGATATCAAGTGTGCCAATATCCTGGTTGATGTAAGCGGGTCAGTCAAGCTTGCGGATTTTGGGTTGGCAAAGGCAACTAAATTTAATGATGTTAAATCAAGCAAAGGATCCCCATACTGGATGGCCCCAGAGGTTGTTAACTTGAAAAATGATGGGTATGGACTAGCAGCTGATATATGGAGCTTAGGTTGTACAGTCTTGGAGATGTTGATAAGGAAACCTCCTTACTCTGATTTGGAAGGAATGCAAGCATTATTTCGAATTGGGAGAGGAGAACCTCCGCCTATTCCTGAAACATTGTCGAAGGATGCCAGGGATTTTATCCTTGAGTGCTTACAAGTTAACCCAAGTAAACGGCCAACTGCAGCTCAGTTATTGGAACATCCATTTCTAAGGAGACCATTTCTTTCTTCCTATTCCACTGCGTCGCCACATATTAAAACCTTTAAGAGCTTATAG 1635 0.4502 MESIWKIRSKTSSNRKPRLERLNARKNINYNPPANPHSPPSSSSSSSSLHHQTSFRVTDGDFDLIFQSLGLSGPEDFSIPTADWEARKVRFASHTSNAAAEPKEDRNSAEVKSGVFLDSDSQLKNDNFSRPVEVGGSKFGVSSDVKVLGGKNGDGAGGGGIKGARPPLLRPIVVDAVGSNWELKRSFGLQDNFVGIGVVGDSPSSSGEIGVVGRVRNGERSMLFTDSGSFTTSHDDDSDIGGERACSSSGSGAVDGSLIEWFNRTFSSWQKGDVLGKGSFGTVYEGFTDDGFFFAVKEASLLDEGSNQGKQSVFQLRQEISLLSRFQHENIVRYFGTQEDQSSLYIFLELVPKGSLLSLYQKYSLNDSHVSAYTRQILHGLKYLHNQNVVHRDIKCANILVDVSGSVKLADFGLAKATKFNDVKSSKGSPYWMAPEVVNLKNDGYGLAADIWSLGCTVLEMLIRKPPYSDLEGMQALFRIGRGEPPPIPETLSKDARDFILECLQVNPSKRPTAAQLLEHPFLRRPFLSSYSTASPHIKTFKSL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04656 544 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Aip03g04656 544 Pfam Protein kinase domain 270 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04656 544 SMART serkin_6 269 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04656 544 MobiDBLite consensus disorder prediction 1 53 - -
Aip03g04656 544 SUPERFAMILY Protein kinase-like (PK-like) 266 531 IPR011009 -
Aip03g04656 544 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 106 - -
Aip03g04656 544 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 158 525 - -
Aip03g04656 544 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 106 - -
Aip03g04656 544 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 158 525 - -
Aip03g04656 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Aip03g04656 544 Gene3D Transferase(Phosphotransferase) domain 1 267 541 - -
Aip03g04656 544 ProSiteProfiles Protein kinase domain profile. 269 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04656 Aip-Chr3 130791011 130795200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04656 18 527 MAP Kinase Kinase Kinase AT4G08500 45.423 1.13e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip03g04656 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04656 - K13414 aip:107631583 1036.17