Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04655 ATGTCTTCCAAAGGAAAAGAACCCCAAAACATGATGGATATTGATCTCTCTTTGAAGATAGATCATCATGAAAATAATAAAGACGGAGAAGCAACACCACCAAAGGTAGTAGCAACAGTCAAAGAGGATCTCAAGAACAAGAAGAAGGAAGAAATAAAGGCACTTAATATTAACAAAGAAGAGGTTCCTGAAGCCGCAGCTGGCGAAATTGAAGATGAATTACCTTCGCAGGATAACACAAAAGCAAGAGAGTTGAGTGTGTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTGCTGAGGAAAGTGGTGGAACAAACTATGAAAGACTACTATGATCTGCAACTCAAATTTTCAATCATCCAAGAAAACAACAATAATAAAGATAAAAGCAAGGATCATGAAATTTCTCTCTCACTTCACGATCATCATCATCGAGAAGAGAATGCAACGATAAGGAAGCTCAATGATGAAGAAGGGCCGCGGAGAATTCATCATTATCAAGATGAGATGTTTAAGTTTAACAACAAAATTGAAAAAGCCTCATCCCTTGCAAACACCGATTGCGGTGACAGTTTAATAAGCGAGAGTGAATTAGGCTTATCGCTAAGGTTGGAGACAAGCACAAGAAAAAAGGAAAAGGAAATTGATGACGAGGAAGATCAAAAGCAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAGGAGAAAAAGACGCAACCTGCAAATTTTGCATCATCGTCAGCGGCTACGAAATTGCAGCGGACACAACATCATGCGTTCCACGCTGCGTCGCCTCCTAACAGAAAAGCTAGGGTTTCGGTTAGAGCAAGATGCGAGGCAGCCAACATGAATGATGGGTGCCAATGGAGAAAATACGGACAGAAGATTGCTAAAGGAAATCCATGTCCACGAGCTTACTATCGTTGCACTGTAGCCCCTGGCTGCCCCGTTAGGAAACAGGTACAGAGATGCATAGATGACATGTCAATACTAATCACAACATACGAAGGAACGCACAACCATCCACTTCCGGTGGGTGCAACTGCCATGGCTTCTTCGGCCGCAGCTTCCTTCATGTTGCTGGACTCAAGCACTTTCTCAGATCATGGCAGCTTCAACGTTAACCACCACCAGCCATTACTACTAAACCCAAACCCTAATAATAAAGGAGTTGTTCTGGACCTGATCGCCAATGAGGCATCATCATCACTACGTTTTCCCGGTATGTCTTGGATGCAAAACAATAATCATAATGGCGGTGCAGGTAGCTTTCATCATCAGAAGGCGGCTGCTAGTAGAGGGATAATAATGGAGCATGGCGAAGAAAGCAAGGCAGTAGTAGATGACATGGTGAAGGTGTCGGCCATTGCGTCAGATCCTAAGTTTAGGGTTGCTGTTGCGGCGGCCATAACATCATTCATCAATAACAATAATAAAGATCATGCTATTGGAGCCACTTCTTTTGCCGCTAATAGCAGCAGCAGCAGCAGGACTACTGCCAACAACTGGATCTTAGATAATAATCATAATTCTCTCTCTAAAGATGCTAATCCATAA 1569 0.427 MSSKGKEPQNMMDIDLSLKIDHHENNKDGEATPPKVVATVKEDLKNKKKEEIKALNINKEEVPEAAAGEIEDELPSQDNTKARELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQLKFSIIQENNNNKDKSKDHEISLSLHDHHHREENATIRKLNDEEGPRRIHHYQDEMFKFNNKIEKASSLANTDCGDSLISESELGLSLRLETSTRKKEKEIDDEEDQKQEEEEEEEEEEEEEKKTQPANFASSSAATKLQRTQHHAFHAASPPNRKARVSVRARCEAANMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASSAAASFMLLDSSTFSDHGSFNVNHHQPLLLNPNPNNKGVVLDLIANEASSSLRFPGMSWMQNNNHNGGAGSFHHQKAAASRGIIMEHGEESKAVVDDMVKVSAIASDPKFRVAVAAAITSFINNNNKDHAIGATSFAANSSSSSRTTANNWILDNNHNSLSKDANP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04655 522 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04655 522 MobiDBLite consensus disorder prediction 494 522 - -
Aip03g04655 522 Coils Coil 41 61 - -
Aip03g04655 522 MobiDBLite consensus disorder prediction 221 239 - -
Aip03g04655 522 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 509 IPR044810 GO:0003700
Aip03g04655 522 Pfam WRKY DNA -binding domain 288 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04655 522 MobiDBLite consensus disorder prediction 141 163 - -
Aip03g04655 522 MobiDBLite consensus disorder prediction 16 30 - -
Aip03g04655 522 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g04655 522 MobiDBLite consensus disorder prediction 210 275 - -
Aip03g04655 522 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 13 509 - -
Aip03g04655 522 Coils Coil 211 243 - -
Aip03g04655 522 MobiDBLite consensus disorder prediction 244 258 - -
Aip03g04655 522 Coils Coil 85 112 - -
Aip03g04655 522 MobiDBLite consensus disorder prediction 1 34 - -
Aip03g04655 522 Gene3D WRKY domain 272 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g04655 522 SUPERFAMILY WRKY DNA-binding domain 281 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04655 Aip-Chr3 130775103 130777562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04655 88 376 WRKY Transcription Factor Family AT1G68150 48.621 1.60e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g04655 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04655 - - aip:107631585 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04655 03 130775103 130777562 Aip03g04655 03 130775103 130777562 ECH