Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04645 ATGGCGTCGTCGAAGATTGTCACGACGAATACGGATCTGCCACGCGACTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTGCTGCTGCTGCTTCTTCTAATTATTATTCCCTTCTTCACAATCAAAATCTGCATTATTATTCAAACTCGTCCATGGTAATGGACGATCTTCTAAACTCCATCTACACCACCACAACAACCACCACCTCTCACCCCTCAAATCCTTCTTCATCCCCTCCTCCTCCACCCAAAACCGTCGATGATGTCTGGAAAGACATGATCCTAACCCACTCTCACAGAGACTCAACTCACCATAATCACCACCCGTTCGAGGAAATGACCCTTGAGGCTTTCCTCTCAAAAAACGCTGCCGTCACTGCTGATGACGTCACCGCTGTTGCTTCTCTTCATAATCATCATCCTGTTCCTCATCAGTTCCCGCAGGTGCCCGCCGTTGAAGGCTCATCCTCCTCCGCAGCTGAGCCTTTTGCCAATGGGATTGATGCTGCGGTGGCAAGTGGATCAAAAGGGAAGAGAAGGGCGGTGGAGGAACCAGTGGACAAGGCCACTCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCTGCTAGGTCCAGGGAACGCAAGCAGGCTTACACAACTGACCTTGAGTCTAATGTTCAACAGCTGGAGATAGAGAATGCCCGGTTATTGAGTGAAGAGGCTGAAAAGAAAAAGAAGAGATTGAAGGAGCTTCTTGAGTTTGTCATCCCAGTTGTGGAGAAGCGTAAACCAAAAAAGCTTCTAAGAACGAATTCAGTTCAGTCATTGTGA 822 0.4793 MASSKIVTTNTDLPRDSSSSSSSSSSSSAAAASSNYYSLLHNQNLHYYSNSSMVMDDLLNSIYTTTTTTTSHPSNPSSSPPPPPKTVDDVWKDMILTHSHRDSTHHNHHPFEEMTLEAFLSKNAAVTADDVTAVASLHNHHPVPHQFPQVPAVEGSSSSAAEPFANGIDAAVASGSKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTTDLESNVQQLEIENARLLSEEAEKKKKRLKELLEFVIPVVEKRKPKKLLRTNSVQSL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04645 273 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Aip03g04645 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 236 IPR004827 GO:0003700|GO:0006355
Aip03g04645 273 MobiDBLite consensus disorder prediction 66 88 - -
Aip03g04645 273 Gene3D - 192 250 - -
Aip03g04645 273 CDD bZIP_plant_BZIP46 193 233 - -
Aip03g04645 273 PANTHER OS05G0437700 PROTEIN 2 271 - -
Aip03g04645 273 SMART brlzneu 189 251 IPR004827 GO:0003700|GO:0006355
Aip03g04645 273 MobiDBLite consensus disorder prediction 1 28 - -
Aip03g04645 273 SUPERFAMILY Leucine zipper domain 193 241 IPR046347 GO:0003700|GO:0006355
Aip03g04645 273 Pfam bZIP transcription factor 190 248 IPR004827 GO:0003700|GO:0006355
Aip03g04645 273 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 271 IPR043452 GO:0003700|GO:0045893
Aip03g04645 273 Coils Coil 216 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04645 Aip-Chr3 130627925 130630878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04645 85 266 bZIP Transcription Factor Family AT5G44080 45.178 6.46e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip03g04645 bZIP_1 3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04645 K14432 - gmx:100101890 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04645 03 130627925 130630878 Aip03g04645 03 130627925 130630878 ECH