Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04638 ATGGTGTTAAGCTTTTTCAGAGGTGTTGAAATTGATATTTGGTCCACACACATAGATCTCTTGCATCGTAATCATCCTCCACCACATGGTGAATATGCCAACAAACTCTTGGGTCTCACATATGCCATAGCAAGCTGCTGCTCCTTTTCTCTCTGGCTCAACATTCAGGGTAAAATGAATGGTAAAGAATACCCAAGGCATCACACAGGGACAGCATTGATGTCCACAATGGGCGCAATACAGGCGACTGTTTTTGCTCTTTGTGTTGATAGGGATTGGACCCAATGGCGCCTTGGTTGGAACATAAGGCTTCTCACTGTGGCTTACGCGGGAATCGTAGCATCAGGTATAGTGATTATTATTACTGCGTGGTGCATAAAAGTGAGAGGCCCTCTATTTGCGTCTATTTTCAATCCTCTACAGCTTCTGCTTGTGGCTATTGTTGCTTCTTTGATTCTCAATGAGAATTTATATTTAGGAAGTGTGGTTGGAGGAGTGGTGATTGTGATTGGCTTGTACACGGTGCTATGGGGAAAGAGCAAAGAAATTGAAGAGAAGCAGAGGATGGATGAGTTAATGAATAATAATAAAGGGTCCCAAGTTGTTGATGTTGATGTTGTTGTTAGCCCCCAAATGAGTGTATCTCCAATAATAATGATGGTGTTGTTGCAAGGGTTGAAGCCAATAATGCTCATGGTGTTGGTGCAGATAACATTTGTGGTGGTGAATGTGTTGTACAAGATGGCCATTAATGATGGAATGAGCATGAGAGTTGCTACTGCTTATCGCCTCATCTTTGCTTCCGCCTTCACTCTCCCCGTTGCTCTCATTTTTGATACCAACAACAACAATAAACCCAAGATTACTCCAAGGGTGCTTCTTTTGGAATTTCTTTGTGGATTATTTGGGGGAACTTTATTTCTGAACTTTTACTTCGCGGCATTGGCTTTGATGCCAGCAACGTTTGTGTTGGCCATCCTTAATCTTTGTCCAGCTGTCACCTTCATCATGGCCATAACCTCAGGTTTGGAAAAGTTGAATTTGGGAGCAGCAGCAGGGAAGGCCAAAGTAATAGGAACAATAACCGGAATCAGTGGTGCAATGGTGTTGACGTTTTACAAAGGCAAACAAATTGATACATGGTCTTCTTCTTCCCGTATCAACCTCTTGCATCATGTACATGGCCGTGATTATGGTAACAAATTCTTGGGTTTTTCATATGCAACTGCAAGCTGCTGCTCTTTTGCATTGTGGCTCAACATTCAGGCTAAGTTGAATCAAGAATTCCCCAGGCACCACACAGGCACAGCTCTTATGTGCACTATGGCCGCATTACAATCCACTCTCTTTGCTCTCTCTCTTGATAGGGATTGGGCCTCCCAATGGAAGCTTGCTTGGAATATCAGGCTCCTCACTGTCGCTTATTCGGGAATTGTGACGTCTGGAATTGTGGTTAATATTATTGCATGGTGCGTGCATATGAGAGGCCCTCTATTTTGCTCTGTTTTCAATCCTCTGCAGCTTGTGCTTGTGGCCATAGCTGCTTCCTTCTTGTTGAATGAGAATTTATATTTAGGAAGTGTGATTGGAGGAGTGTTGATAGTGATTGGGCTATACACAGTGCTTTGGGGGAACAGCAGAGAAACCAAACACAAGATTCAGATTCACACTCAGTTATCAGAAGAAATCACAAGAGATCCTCTTCAAGTTATTGTTATGTCCCCGCAGAAACAACAACAAAACTCATCATCAAATTCAGAATTGCCCTCCTCATAA 1776 0.4291 MVLSFFRGVEIDIWSTHIDLLHRNHPPPHGEYANKLLGLTYAIASCCSFSLWLNIQGKMNGKEYPRHHTGTALMSTMGAIQATVFALCVDRDWTQWRLGWNIRLLTVAYAGIVASGIVIIITAWCIKVRGPLFASIFNPLQLLLVAIVASLILNENLYLGSVVGGVVIVIGLYTVLWGKSKEIEEKQRMDELMNNNKGSQVVDVDVVVSPQMSVSPIIMMVLLQGLKPIMLMVLVQITFVVVNVLYKMAINDGMSMRVATAYRLIFASAFTLPVALIFDTNNNNKPKITPRVLLLEFLCGLFGGTLFLNFYFAALALMPATFVLAILNLCPAVTFIMAITSGLEKLNLGAAAGKAKVIGTITGISGAMVLTFYKGKQIDTWSSSSRINLLHHVHGRDYGNKFLGFSYATASCCSFALWLNIQAKLNQEFPRHHTGTALMCTMAALQSTLFALSLDRDWASQWKLAWNIRLLTVAYSGIVTSGIVVNIIAWCVHMRGPLFCSVFNPLQLVLVAIAASFLLNENLYLGSVIGGVLIVIGLYTVLWGNSRETKHKIQIHTQLSEEITRDPLQVIVMSPQKQQQNSSSNSELPSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04638 591 SUPERFAMILY Multidrug resistance efflux transporter EmrE 457 547 - -
Aip03g04638 591 SUPERFAMILY Multidrug resistance efflux transporter EmrE 95 181 - -
Aip03g04638 591 Pfam EamA-like transporter family 227 370 IPR000620 GO:0016020|GO:0016021
Aip03g04638 591 Pfam EamA-like transporter family 37 176 IPR000620 GO:0016020|GO:0016021
Aip03g04638 591 Pfam EamA-like transporter family 404 542 IPR000620 GO:0016020|GO:0016021
Aip03g04638 591 PANTHER WAT1-RELATED PROTEIN 227 556 IPR030184 GO:0016021|GO:0022857
Aip03g04638 591 PANTHER WAT1-RELATED PROTEIN 1 196 IPR030184 GO:0016021|GO:0022857
Aip03g04638 591 SUPERFAMILY Multidrug resistance efflux transporter EmrE 262 371 - -
Aip03g04638 591 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 227 556 - -
Aip03g04638 591 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04638 Aip-Chr3 130563833 130569205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04638 226 589 Nodulin-like Gene Family AT1G25270 38.753 7.92e-76 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04638 - - gsj:114424758 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00863 10 10470523 10474819 Aip03g04638 03 130563833 130569205 PCT