Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04634 ATGGTGGGAAGTGTTGATTCAAGCATGAATGGAGGAGGTGTAGGGGGATGTTTGATCAAAGAACTAGTCCATCATGATGGCGAAAGGGAGAAGATAGTTCTGGGAAGAGATATGCATACGGTGTCGTTTGAAATCACTGAACCAGATCTGGATGATGACGTTACAGGAGAAAGAGAAGCTTATATGGCTAGTGTTTTATCCAAGTACAAAAAATCCCTGACAGAAAAAACCAAGTTCCATCTAGGCTATCCGTACAATCTGGATTTCGACTACGATGCGCTGTGTCAGCTTCAGCACTTCTCCATAAACAACCTGGGGGATCCGTTTATTGAGAGCAACTACGGGGTGCACTCGAGGCAGTTCGAGGTTGGTGTTTTGGACTGGTTTGCAAGGTTGTGGGAACTTGACAAGAACCAGTACTGGGGATACATAACAAACTGTGGCACAGAAGGGAATCTCCATGGAATCCTTGTTGGCAGAGAGTCCAAGCTTCTTTGTAACAAGGATAAGCCTGCAATTGTTAATGTTAACATAGGTACAACTGTCAAAGGAGCTGTTGATGATCTTGATTTGGTTATTAACAAGCTTCAGGAAGCAGGATTCTCCCATGACAGATTCTATATCCATTGTGATGGGGCTTTGTTTGGTCTCATGTTACCTTTTGTCAAACGAGCTCCGAAAGTGAGTTTCAAGAAGGCAATTGGAAGCGTGAGTGTGTCAGGGCACAAATTCGTTGGGTGTCCAATGCCATGTGGGGTGCTGATAACAAGATTGGAACACGTGAAGGTGCTGTCAAGGAACGTAGAGTACCTTGCCTCGAGAGATGCAACAATCATGGGTAGCCGTAACGGCCACGCGCCACTCTTCCTATGGTACACTCTAAACAGAAAAGGATACAGGGGATTCCGGAAAGAGGTTCAGAAATGCTTGAGGAACGCACACTACTTCAAGGACCGCCTCGTCCACGCGGGGATCGGAGCAATGCTGAACGAGCTCAGCAGCACCGTCGTGTTTGAGCGCCCTCACGACGAGGAGTTCGTGCGCAAGTGGCAGTTGGCGTGCCAGGGGAACATAGCACATGTTGTGGTCATGCCAAACGTCACCATACACAAGCTGGATGATTTTCTTGACGAGCTTGTGCAAAAGCGTGATGCATGGTTCGGAGAAGGGAAATCTCAGCCTCCTTGTATAGCTTCTGATGTTGGCATACACAATTGCCTTTGTGCTTTGCATAGGTGA 1239 0.4722 MVGSVDSSMNGGGVGGCLIKELVHHDGEREKIVLGRDMHTVSFEITEPDLDDDVTGEREAYMASVLSKYKKSLTEKTKFHLGYPYNLDFDYDALCQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELDKNQYWGYITNCGTEGNLHGILVGRESKLLCNKDKPAIVNVNIGTTVKGAVDDLDLVINKLQEAGFSHDRFYIHCDGALFGLMLPFVKRAPKVSFKKAIGSVSVSGHKFVGCPMPCGVLITRLEHVKVLSRNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYRGFRKEVQKCLRNAHYFKDRLVHAGIGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTIHKLDDFLDELVQKRDAWFGEGKSQPPCIASDVGIHNCLCALHR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04634 412 Gene3D Aspartate Aminotransferase, domain 1 295 384 IPR015422 GO:0003824
Aip03g04634 412 Gene3D - 96 164 IPR015421 GO:0003824
Aip03g04634 412 PANTHER SERINE DECARBOXYLASE 24 161 - -
Aip03g04634 412 Pfam Pyridoxal-dependent decarboxylase conserved domain 171 331 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip03g04634 412 PANTHER SERINE DECARBOXYLASE 162 412 - -
Aip03g04634 412 PANTHER - 162 412 - -
Aip03g04634 412 PANTHER - 24 161 - -
Aip03g04634 412 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 236 257 IPR021115 GO:0016831
Aip03g04634 412 Gene3D - 165 294 IPR015421 GO:0003824
Aip03g04634 412 SUPERFAMILY PLP-dependent transferases 72 384 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04634 Aip-Chr3 130551065 130552574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04634 178 318 Calmodulin-binding Proteins AT1G65960 25.333 7.96e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04634 K25193 - gmx:100792053 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04634 03 130551065 130552574 Aip10g00858 10 10407832 10412238 PCT