Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04622 ATGGTGTCGCAGCCCCCTTTCCTTCTCCATCGAACACCGACAGACCCTGAGAAGAGTCAGGACCTTGCCTCAAACCAGAAGCTTGCTACTCATGGGTGTTGCCTTCTCCGTCTTTGCCCTCCAGGCCGCGTGCTGCTGTCCTCCTCCTTGAGCAACTTCACTCCTAGAGAGACTatgtcatgggttactttccacataaacatttttagttttgagATGGATGACTTGTCCAAGAGCCAGATGTTTGTGATTCATGGTGTTGCTGCAGTTGGCTCTGTGGCTTTTGCTTCTGCTCTCACATATCCCCTCGACACCATGAAAGTCCTGACTCAGGTTGCTTCTAGTTCCGGTAAACAATTGAATGCTGCCGAGCTCTTGCTTAGAATTCTCACTCTCTCTGGTAATTCAGGTCTGTTTAGTGGTTATGGATCGTTAGCACTTGGAAGGACTCTTGGTCTCGGAGCTCGATTTGGGGTCTATGAAATCATCACTGCCTTTTATAAGGATGGGCTGGAAGATAATTATGTCTCTGCTTCTGATGCTCTTTTGGCTGGAATGGCAGCTGGTGCTGTAGAGGCTTTGATAAGCTCTCCATTTGAACTTATCAAGCTTCGTGAACAGGTTTCCTCAGCTTCATACATTCCGAACTCTACTTTTGCTTTGGACAAGGGAGCCCAACCACCTTTAATTTCAAGATTACTGAGTGGCTGTTATCCTGACAAGAGATCCTTGAACCAATATGTCGGTCTCATCTCTACCCTATCTACCAAAAATACTAATGTGACAAGTGCACTGCTGGAGTATCCTTGGATGATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTCAGAAGGCCATCTGATATTATATCATTGGAAGGATGGGGCGCATTATGGAGAGGTCTTCGTTCGGGAATTGCTCGAGATTCTGTGTTTGGTGGTGTATTTTTCTCAAGCTGGCAGTTTCTGCATCAAGCAATGCTTGATTGGAAGGCTGTAGGGATGGATCCTCCGCCCAGGTCAGATGAAGAAGTTGGTCCATTGTCTCCTTTATTTGTTAGTATTGCTGCTGGATTGTCAGCTTCAGTTGCTGCTGCGGCTTCTCATGCCTTTGATACTACAAGAACTAGATCACAGTGCACTGTGCTACCAAAGTATGTTTCAATGGAGAGAAGGCTCCTGAAGTGGAAACAGCCAGGAAACAAGTTTGAAAGATATACCGGGATCCATCCTTCTGACAGGAATCTATTGTTCCGTGGTCTTCGGTGGCGGATGGCTCGCTCTGGGCTTGCATCATTCATGATTGTAGGAAGTTATTTCTTCGCTGTCGATCATCTTGCTTCTAATTTGACTTGA 1359 0.4525 MVSQPPFLLHRTPTDPEKSQDLASNQKLATHGCCLLRLCPPGRVLLSSSLSNFTPRETMSWVTFHINIFSFEMDDLSKSQMFVIHGVAAVGSVAFASALTYPLDTMKVLTQVASSSGKQLNAAELLLRILTLSGNSGLFSGYGSLALGRTLGLGARFGVYEIITAFYKDGLEDNYVSASDALLAGMAAGAVEALISSPFELIKLREQVSSASYIPNSTFALDKGAQPPLISRLLSGCYPDKRSLNQYVGLISTLSTKNTNVTSALLEYPWMMTGSGKPPSVCNVRRPSDIISLEGWGALWRGLRSGIARDSVFGGVFFSSWQFLHQAMLDWKAVGMDPPPRSDEEVGPLSPLFVSIAAGLSASVAAAASHAFDTTRTRSQCTVLPKYVSMERRLLKWKQPGNKFERYTGIHPSDRNLLFRGLRWRMARSGLASFMIVGSYFFAVDHLASNLT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04622 452 PANTHER CARRIER PROTEIN 74 448 - -
Aip03g04622 452 SUPERFAMILY Mitochondrial carrier 82 437 IPR023395 -
Aip03g04622 452 Pfam Mitochondrial carrier protein 82 168 IPR018108 -
Aip03g04622 452 Gene3D Mitochondrial carrier domain 82 450 IPR023395 -
Aip03g04622 452 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 166 IPR018108 -
Aip03g04622 452 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g04622 452 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 74 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04622 Aip-Chr3 130470143 130473481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04622 101 330 Antiporters AT1G79900 24.621 3.33e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04622 - - ahf:112734472 711.064