Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04620 ATGGCAGCAGTGCATGCATTTGGCACCCTGTTGCTTGTTCTTTCCTCTCTGTTGAGCTTTGTAATTGTATCCTCTGATATCAATTTTGTACAAAATGGATTTCTAGCAGCAGGCTTGAAACTTGATGGATCTTCTTATCTGAGGCCTAATGGTATACTTACCTTGACCAACGATTCCTCAAGGATCCTTGGCCATGCATTCTATCCATCTCCTTTACCATTCAAATCTAGCAGAAACAAATCCTTTGTTGCAACCTTTAGCACTTCCTTTGTGTTCTCCATCATTCCCAAATACCCTGAACTTGGTGGGCATGGTCTTGCTTTCGTCCTAATATCGACCAGAGCACCGAAAGGTTGCCTTTTAAACCAATATTTAGGCCTCCCAAATGAGACAAGTAATCAAGAATTCTCTACCAGGTTCGTAGCTATAGAGTTTGATGGGATACAAAACCTTGAACTACAGGACATTGATGACAATCATGTGGGAATCGATATCTCCAGCCTCATCTCTGTGGTATCTGAGTCAGCAGCATACTATGGAAATGGCCAACATCTCAGCAAGAACATTCCAATTAATCTCAAGAGTGGAGAGCCCATTCAAGCATGGGTTGATTACAATGAAGAGAAGAAGTTGATGAATGTTACAATCTCTCCTTTTGGCATGCCAAAGCCATATTTCCCTCTGATATCTTTTCCTTTAGACCTATCTTTGGTGTTTAATGACTACATGTATGCAGGCTTTTCTGCATCCAATGGTTTATTGATAGCTGAGCATAATATACATGGCTGGAGCTTCACCATTGGAGGAGAAATGAAAGAGCTAAATAAATCAACTCTTCCACTCATTCGATCAAGTAGTACAAATAAAGTGGCGCATAGAAAAGCTTTGGCATTAAGCATCACTCTGGCAACTCTTTGTGCCTTGGTAATCATAGCAGCTACTATCATCCTGCGCGGATTAAGAAATAAGGACGAGATCTTAGAAGACTGGGAACTCAAATATGGAGCTTATAGATTTGGATACTCTGAGCTCTATTCAGCTACAGGAAGGTTTGGTGAGAAAAACCTTATTGGGTGTGGAGGATTTGGGAAAGTATACAGAGGAGTATTACCAACAGGACTTGAAGTAGCTGTGAAGCGAGTCGCTCCTAATTCAAGGCAGGGAATGAGAGAATTTGTTGCAGAAATAACAAGCATGGGGAATCTAAGGCATAGAAATCTGGTGCAGTTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCCTTGTTTATGACTATGTCCCAAATGGAAGCCTAGATGCGCTTTTATTTGAGAATGATCATCAAAAGAAGAAGTTACTAACTTGGGACCAGAGATACAAGATCGTTACTGGTGTTGCACAAGGGCTGCTATACCTCCATGAAGAATGTCCACTGCAGGTGGTTCACAGAGATGTAAAGCCAAGCAATGTCTTGATAGATGCAGATCTGCAACCAAGGCTTGGTGATTTTGGCTTAGCAAGGTGTCAGGAGCACGGAATCAATCCGAAGACAACACACGTAGTAGGAACACTAGGATACATTGCACCTGAACTCTCCAAGACTGGGAAAGCAACAAAAAGCACGGATGTATATGGGTATGGTGTACTCATTTTGGAAGTAGCTTGTGGAAGAAGGCCAATAGAGCCCCAGAAGACTCCCGGGGAGCTGGTATTAGTGGACTGGGTGAGTGAACTACACTGCCAAGGGGAGATCGGCAGAGCAATTGACCCAAGTTTAGATGAGTATGACAAAGATGAAGCTGATCTTGTGCTTAGGCTTGGATTGCTTTGTTGTCATCCCATACCTGATTATAGGCCTAATATGAGAAGGATTGTCCAGTTCCTTCTTAAAGAAACCACCCTTCCTCCAGTTCTTCCTGACATTTGTTGTGCCTGGGAACCTCCTAGAGCAATGAAGGAATATGAGCAAAATATTCGAGATGATTCTGACCCTTCAAGCTCTGGAGTGTTCTCATCAAACTATTTTAGTCATACAAGCTTTGACAAGTGA 2031 0.4254 MAAVHAFGTLLLVLSSLLSFVIVSSDINFVQNGFLAAGLKLDGSSYLRPNGILTLTNDSSRILGHAFYPSPLPFKSSRNKSFVATFSTSFVFSIIPKYPELGGHGLAFVLISTRAPKGCLLNQYLGLPNETSNQEFSTRFVAIEFDGIQNLELQDIDDNHVGIDISSLISVVSESAAYYGNGQHLSKNIPINLKSGEPIQAWVDYNEEKKLMNVTISPFGMPKPYFPLISFPLDLSLVFNDYMYAGFSASNGLLIAEHNIHGWSFTIGGEMKELNKSTLPLIRSSSTNKVAHRKALALSITLATLCALVIIAATIILRGLRNKDEILEDWELKYGAYRFGYSELYSATGRFGEKNLIGCGGFGKVYRGVLPTGLEVAVKRVAPNSRQGMREFVAEITSMGNLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDALLFENDHQKKKLLTWDQRYKIVTGVAQGLLYLHEECPLQVVHRDVKPSNVLIDADLQPRLGDFGLARCQEHGINPKTTHVVGTLGYIAPELSKTGKATKSTDVYGYGVLILEVACGRRPIEPQKTPGELVLVDWVSELHCQGEIGRAIDPSLDEYDKDEADLVLRLGLLCCHPIPDYRPNMRRIVQFLLKETTLPPVLPDICCAWEPPRAMKEYEQNIRDDSDPSSSGVFSSNYFSHTSFDK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04620 676 Pfam Legume lectin domain 27 278 IPR001220 GO:0030246
Aip03g04620 676 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Aip03g04620 676 PANTHER - 62 661 - -
Aip03g04620 676 CDD STKc_IRAK 357 624 - -
Aip03g04620 676 Pfam Protein kinase domain 353 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04620 676 Gene3D - 25 290 - -
Aip03g04620 676 SMART serkin_6 351 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04620 676 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04620 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 270 IPR013320 -
Aip03g04620 676 Gene3D Transferase(Phosphotransferase) domain 1 427 628 - -
Aip03g04620 676 CDD lectin_legume_LecRK_Arcelin_ConA 27 269 IPR001220 GO:0030246
Aip03g04620 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Aip03g04620 676 SUPERFAMILY Protein kinase-like (PK-like) 334 639 IPR011009 -
Aip03g04620 676 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Aip03g04620 676 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 62 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04620 Aip-Chr3 130428410 130430440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04620 26 652 Receptor kinase-like Gene Family AT3G55550 47.123 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g04620 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04620 - - ahf:112792279 1313.13