Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04613 ATGGAGCGAGTGGTTTCATGTTTAATGGGATTGGGACCGTTTCTTCTTTATGCAGCTTTGGTATTTGATGTTATGCTTGAGGTTTCTGGCAATCAAGAAGGTGATGCCCTGAATGCATTCAAGACTCAGAGAGGCTTGAAAGATCCTAATAATGCTCTTCAAACCTGGGATGCCACTCTTGTAAATCCTTGCACATGGTTTCATGTCACTTGCAACCAAGATAATAGTGTGACCAGCATTGATCTTGGAAATGCACATATTTCGGGTCACCTAGTTCCAGAACTTGGTCAACTTCAGAATTTGCAAAGGCTGGAACTTTTCAATAATGACTTAACTGGGCCTATCCCAAATGAGCTTGGAAATTTGATAAATTTGGAGAAGTTGGATCTTTACTCAAACAACTTAACTGGTGTCATACCAGACACATTGGGCAACCTTAAAAATTTACACGACCTGCGTCTCAACAACAACAGTTTGTCAGGAAAAATTCCCATATCTTTGACCAATATTTTGACTCTGCAAGTCCTTGATTTATCATACAACCAGTTAACAGGAAATATTCCAGTCAATGGTTCATTTTCATCATTTACCCCCGTCAGTTTCGAACATAACCACTTGAATGAAACAACAAATCCATCTCCACGCTATGTTCCACCACAAAATACCACGTCAGTTAAGAGTGCCATCGGAGCTATTGCTGGAGGAGTTGCTGCTGGAGCTGCTTTATCAATTGCAGCCCCTGTGATTGTAGTTGCTTACTGGCTACGAAGGAAACCACAGGATGAGTACTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCCACTTAAGAAGTTTTCTCTTCGTGAGCTGCAAATTGCTACAGATCACTTCAATGCCAAAAATGTGTTGGGAAAGGGTGCGTTTGGTAAGGTTTACGAAGGACGCTTAGCCGATGGCAAGCCAGTAGCAGTGAAAAGACTTAAAGAGGAACGCGCCTACAGTGAGGACTTTCAGTTTCAAACTGAAGTGGAAATGATTGGCGTGGCTAAGCATCGCAATTTGCTTCAGCTGCTTGGTTTTTGTATGACTCCTACTGAACGCATGCTTGTGTATCCTTTGATGGTTAATGGAAGTCTAGCATCTTGCTTAAGAGGGCGTGCGCCATCAAAACCGCCGCTTGGTTGGGCACAACGGGAGTCTATTGCGCTGGGATCTGCTAAGGGGCTTGCTTATTTGCATGAGCATTGTAACCCGAAGATTATTCATCGGGATGTTAAAGCTGATAATATATTGCTAGACGAACACTTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGATTTTAAAGATACTCATGTTACCACAGCTGTAAAAGGTACAATTGGACATATAGCACCCGAATACCTTGGAACTGGAAAGTCTTCGGAGAAGACTGATGTTTATGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGTCTTTCGACATGGCAAGGATTGCCAGAGATGAAGAAATCTTATTGCTTGCTTGGGTAAAAGGGCATCTGAATGACAACAAGTTGGACAAACTGGTGGATAGTGATTTACAGGGAGACTATAACTTAGAAAAGGTGGAGCAATTAATCCAAGTGGCCATATTATGCACACAAGACTCTCCTATGGATAGGCCTAACATGTCTGAGGTAGTGAGAATGCTGGAAGGTGCTGGTTTGGCTGAAAGATGGGAAGAATGGAAGAAAAAGGACAAGATCCGGCAAGAATTCGACCGCACCCACCGTTATGTTGCCAATTTGAGGAACCGTGATGAGTCAACCTCAAATGCCAACATGGAACCAGAACAACTCTCAGGTCCTAGATGA 1866 0.4287 MERVVSCLMGLGPFLLYAALVFDVMLEVSGNQEGDALNAFKTQRGLKDPNNALQTWDATLVNPCTWFHVTCNQDNSVTSIDLGNAHISGHLVPELGQLQNLQRLELFNNDLTGPIPNELGNLINLEKLDLYSNNLTGVIPDTLGNLKNLHDLRLNNNSLSGKIPISLTNILTLQVLDLSYNQLTGNIPVNGSFSSFTPVSFEHNHLNETTNPSPRYVPPQNTTSVKSAIGAIAGGVAAGAALSIAAPVIVVAYWLRRKPQDEYFDVPAEEDPEVHLGPLKKFSLRELQIATDHFNAKNVLGKGAFGKVYEGRLADGKPVAVKRLKEERAYSEDFQFQTEVEMIGVAKHRNLLQLLGFCMTPTERMLVYPLMVNGSLASCLRGRAPSKPPLGWAQRESIALGSAKGLAYLHEHCNPKIIHRDVKADNILLDEHFEAVVGDFGLAKLMDFKDTHVTTAVKGTIGHIAPEYLGTGKSSEKTDVYGYGVMLLELITGQRSFDMARIARDEEILLLAWVKGHLNDNKLDKLVDSDLQGDYNLEKVEQLIQVAILCTQDSPMDRPNMSEVVRMLEGAGLAERWEEWKKKDKIRQEFDRTHRYVANLRNRDESTSNANMEPEQLSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04613 621 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Aip03g04613 621 PANTHER BNAA08G11770D PROTEIN 13 621 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aip03g04613 621 ProSiteProfiles Protein kinase domain profile. 294 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04613 621 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Aip03g04613 621 SUPERFAMILY L domain-like 37 209 - -
Aip03g04613 621 Gene3D Transferase(Phosphotransferase) domain 1 371 588 - -
Aip03g04613 621 SUPERFAMILY Protein kinase-like (PK-like) 273 569 IPR011009 -
Aip03g04613 621 MobiDBLite consensus disorder prediction 601 621 - -
Aip03g04613 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 621 - -
Aip03g04613 621 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Aip03g04613 621 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Aip03g04613 621 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Aip03g04613 621 SMART serkin_6 294 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04613 621 Pfam Protein tyrosine and serine/threonine kinase 296 568 IPR001245 GO:0004672|GO:0006468
Aip03g04613 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Aip03g04613 621 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04613 Aip-Chr3 130358578 130363394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04613 13 621 Receptor kinase-like Gene Family AT4G33430 63.278 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip03g04613 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04613 K13416 - gmx:100800522 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04613 03 130358578 130363394 Aip03g04613 03 130358578 130363394 ECH