Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04609 ATGGATGCTTTTTTGTTGAGCTCCAATTCAAAGCCATTTCAGTGCCTTCCATGGCTCTCATCAACCAAGCATCAAAGGCACTATTCTCATATCCATCTTTCATGCAGAGCCACAAAGGTGGAGTGTGAGAGCAACTTCTACAAGGTTCTCAGTGTTAGTCCAAAGAGTGCAACCATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCTAATAGGATGTTTGTGCAGTTGAATGCTGCTTATGAGACCTTGTCCAACCCCATGCTTAGAGAACAGTATGATACTCAATTAGCTTTGAGAGATAATGAAGTAGTGATGAGTGTTAGCCATGATTATTCTGAAACAAGTTTTTGGGAGGAGGAGCAACACCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAGCAAAAGGGCAACAGAATGAGGGCACCAACCAGAAGAAAAGACAGGAACTGA 516 0.4399 MDAFLLSSNSKPFQCLPWLSSTKHQRHYSHIHLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLREQYDTQLALRDNEVVMSVSHDYSETSFWEEEQHQVVVELKTRSRRRMEQKGNRMRAPTRRKDRN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04609 171 Pfam DnaJ domain 45 111 IPR001623 -
Aip03g04609 171 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 7 169 - -
Aip03g04609 171 SUPERFAMILY Chaperone J-domain 32 110 IPR036869 -
Aip03g04609 171 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Aip03g04609 171 MobiDBLite consensus disorder prediction 150 171 - -
Aip03g04609 171 CDD DnaJ 45 103 IPR001623 -
Aip03g04609 171 ProSiteProfiles dnaJ domain profile. 45 114 IPR001623 -
Aip03g04609 171 SMART dnaj_3 44 106 IPR001623 -
Aip03g04609 171 PRINTS DnaJ domain signature 48 66 IPR001623 -
Aip03g04609 171 PRINTS DnaJ domain signature 66 81 IPR001623 -
Aip03g04609 171 PRINTS DnaJ domain signature 86 106 IPR001623 -
Aip03g04609 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 7 169 - -
Aip03g04609 171 Gene3D DnaJ domain 21 142 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04609 Aip-Chr3 130332722 130333237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04609 47 112 C2H2 Transcription Factor Family AT1G74250 42.647 2.24e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04609 - - gmx:100811478 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04609 03 130332722 130333237 Aip10g00831 10 10137079 10137555 PCT