Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04588 ATGGCTGAGTACGGGGATCCAGAGAGGGGTTCGTCGATGGATTCCACGGAATCGAGGTGGGTTTTCCAGGAAGACGAGGACGATGCCTCCGAGATTGATGAGTTCGAGGCCGATTTGCGGCACCACCATTCTGTTCTGGATTCTGAGGACGAGGATAATGGCGAGCAGAGGCTCGTTCGAACTGGCCCGCGAATCGATTCCTTCGATGTTGAAGCTCTTGAGGTCCCTGGTGTTCAGAGAAACGAATTTGAGGATGTCAACATGGGAAAGAGAATCATATTGGCTTTTCAAACTCTTGGTGTTGTATTTGGTGATGTTGGAACGAGTCCATTATATACCTTCAGTGTTATGTTCAGGAAGGCCCCTATTAATGACAATGAGGACATTATTGGGGCATTGTCACTTGTATTGTATACTCTACTATTGATTCCTTTGGTGAAGTATGTACTGGTTGTTCTGTGGGCCAACGATGATGGTGAAGGTGGCACATTTGCCTTGTACTCTTTGATTTGTCGTAATGCTAAGGTGAGTCTACTTCCCAATCAGTTGCCATCAGATGCCCGGATATCAGGATTTAGGCTGAAGGTGCCTTCCCCTGAGCTTGAAAGGTCATTAAAATTCAAGGAAAGGCTAGAGTCTTCAGTGACTCTCAAGAAGATTCTGCTTCTATTAGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTAACACCGGCAATGTCAGTTCTATCATCTGTTAATGGTTTGCGAGTCGGCGTAGATGCAATTGAGCAAGATGAAGTAGTGATGATTTCTGTTACTTGCCTCATCATCTTGTTCAGTGTGCAGAAGTATGGAACAAGTAAAATGGGGCTTGCTGTAGGACCTGCTTTGTTCATATGGTTTTGCTCTCTTGCGGGCATTGGGATATACAATCTAGTCACATATGACACTAGTGTCTTGAGGGCCTTTAATCCTATTCACATCTATTATTTCTTCGCAAGGAATTCAACCAAAGCATGGTATTCACTAGGGGGCTGTATTTTGTGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGTTATTTCTCTGTTCGATCAGTTCAGCTTACGTTTGTCTTTCTTGTTTTGCCGTGTTTACTATTGGGTTATTTGGGTCAAGCAGCATATCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGAGGTGCATTCTGGCCAACTTTCCTCATTGCTCTTGTTGCTGCACTAATTGCTAGCCGGGCTATGACGACAGCCACATTTTCATGTATAAAGCAGTCAACTGCACTTGGTTGTTTTCCTCGTCTAAAAATAGTTCATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTATTGGTTGTTTCCCTGGTGTTTGTCTGCTCTATATCCAACATTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGGTCCTTATATGGCAGACACACATCATCATAGTGCTAAGTTTTGTGGTAGTCTTCTTGGGATTGGAGTTGGCTTTCTTTTCCTCAGTTTTGTGTAGTATACCGGATGGAAGTTGGATTATACTGGTCTTAGGCATAATAAATTTTTTTATAATGTTCGTATGGAATTATGGAAGCAAACTTAAATATGAAACTGAAGTCAAGCAGAAGCTGTCAATGGATTTAATGCGAGAATTGGGCTCCAATCTGGGGACAATACGAGCTCCTGGGATTGGGTTACTTTATAATGAGTTGGTCAAAGGAATTCCAGGAATTTTTGGACATTTTCTAACCACACTTCCTGCAATACACTCCATGATCATATTTGTGAGTATCAAGTATGTTCCAGTTTCTATGGTACCTCAAAGTGAAAGGTTCCTGTTCAGGCGAGTCTGCCAGAAAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGCTACAAAGATGTTCGCAAAGAAAATCACCAGACTTTTGAGCAGCTATTGATGGAGAGCCTAGAGAAGTTTATACGTCGAGAAGCTCAAGAGAGGTCACTTGAGAGTGATGGGGATGATGATAGTGATTCAGAAGATGACTATTCTGCTTCTAGGGTCCTCATAGCTCCCAATGGGAGTGTTTACTCACTCGGCGTTCCCCTTCTGGCTGAATTTAATGATACAAACATTCCCACTTTTGAAGCAAGCACATCAGAGGAGGTGGCTTCAGCATCTTCAAATAATCCCCCAGTGCTTGACGCAGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTGTTGGTCATGGGGATATACGGGCTAGGAAAGACTCCTGGTTCTTAAAGAAGCTAGTTATTAACTATTTTTATGCCTTTTTGAGAAAGAACTGCAGGAGGGGTATCGCAAACTTAAGTGTACCCCATTCAAATCTGATGCAGGTTGGCATGACTTACATGGTTTGA 2526 0.4256 MAEYGDPERGSSMDSTESRWVFQEDEDDASEIDEFEADLRHHHSVLDSEDEDNGEQRLVRTGPRIDSFDVEALEVPGVQRNEFEDVNMGKRIILAFQTLGVVFGDVGTSPLYTFSVMFRKAPINDNEDIIGALSLVLYTLLLIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLPSDARISGFRLKVPSPELERSLKFKERLESSVTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLRVGVDAIEQDEVVMISVTCLIILFSVQKYGTSKMGLAVGPALFIWFCSLAGIGIYNLVTYDTSVLRAFNPIHIYYFFARNSTKAWYSLGGCILCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPRGAFWPTFLIALVAALIASRAMTTATFSCIKQSTALGCFPRLKIVHTSRKFMGQIYIPVINWFLLVVSLVFVCSISNIDEIGNAYGIAELGVMMMTTILVTLVMVLIWQTHIIIVLSFVVVFLGLELAFFSSVLCSIPDGSWIILVLGIINFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVSMVPQSERFLFRRVCQKSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDDYSASRVLIAPNGSVYSLGVPLLAEFNDTNIPTFEASTSEEVASASSNNPPVLDAEQSLERELSFIRKAKESGVVYLVGHGDIRARKDSWFLKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04588 841 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g04588 841 TIGRFAM kup: potassium uptake protein 94 841 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g04588 841 MobiDBLite consensus disorder prediction 1 28 - -
Aip03g04588 841 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip03g04588 841 PANTHER POTASSIUM TRANSPORTER 16 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04588 Aip-Chr3 130181100 130187289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04588 11 841 Inorganic Solute Cotransporters AT5G09400 77.725 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04588 - - gmx:100778388 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04588 03 130181100 130187289 Aip10g00815 10 9938100 9943466 PCT