Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04587 ATGATGGTGCAGAGGGATCGCCACGCCATTCTCGTGCCAACCACCACCAACAACAATATCAATTCCTACGCCTCCCGCCACATTCCGAGCTCACCCGCGGTTTTCAGTTTCTCGCCGTCGCTCAGTGCCTTCCGCGTGCTGCTTCCGCCGCGACCTCCGTGCCGTTTACGGTGCGTTTCAAGCTCCGTCGCTTCCTTCGCTTCTGAAGCCGGCGGCGGAGGCTTCGGCGGAGCCGGAACTGGCGGCGAAGGAGGAGGAGGAGGCGGCGGCGGCGAGTCTGGAGACGGTAGCGTGAAGTTAGTTGGAGACGCAGCTCAGGAGGTTTCGGCGCTTTCGCCTGATGTGATCATTCTCGATGTTTCGGGAATGACGTGCGGTGGATGTGCTGCGACTGTAAAGAGGATTCTGGAAAGTCGTCCCCAAGTGTCATCTGCTAGTGTGAATCTAACTACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCGAAAAAAGCACCAAATTGGCAGAAGCATTTAGGGGAGGCACTTGCAGAGCATTTGACTAACTGTGGATATAGCTCCAGCCTTCGAGATTCGGGAAGAGACAATTTCATCCAAATTTTTGAAAGAAAGATGGAGGAAAAGCGCAAACAATTAAGACAAAGTGGTCGCGAGCTAGCTGTTTCTTGGGCTCTTTGTGCTGTTTGTCTTGTTGGCCATCTCTCTCATTTCTTTGCAGCTAGGGCACCGTGGATTCATGCATTTCATTCTGTTGGATTTCATGTGTCACTGTCTTTGTTTACATTGCTTGGTCCTGGTCGCCAGCTTATCTTAGATGGACTAAAAAGCCTTCTTAAAGGGGCACCAAACATGAACACCTTAGTTGGTCTTGGGGCCTTGTCATCATTTACAGTCAGTTCATTTGCTACGCTGCTACCAAAATTGGGTTGGAAAGCTTTCTTTGAGGAACCAATTATGCTGATTGCATTTGTCTTGTTAGGAAGGAATCTTGAGCAGAGAGCAAAAATTAAAGCAACAAGTGATATGACAGGACTTCTTAGTTTACTACCATCAAAAGCCCGCCTTCTTGTTAATAATGGGAAAACAGAAGTTGACTCAATTGTTGAAGTTCCTTCTGACAGTCTTTCTGTGGGAGACCAAATTATTGTGTTGCCTGGAGATCGTATCCCAGCAGATGGAATTGTCAGATCTGGTAGAAGCACTGTAGATGAGTCAAGTTTCACCGGTGAGCCACTTCCAGTAACAAAATTACCAGGGAGTGATGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTCACAATGGAAGTAAGGAGACCAGGCGGTGAGACTGCTATGGGGGACATTGTACGTCTCGTTGAAGAGGCACAAAGCAGGGAAGCTCCAGTACAGAGATTGGCTGATAAGGTGGCTGGACACTTCACTTATGGGGTGATGGCAGTCTCTTTCACCACTTTTACATTTTGGAGTCTATTTGGCAAACATGTTTTACCTACTGCTTTATACCAAGGAAGTGCAGTTTCATTGGCTCTGCAGCTTGCTTGCAGTGTTCTGGTTATTGCTTGTCCATGTGCACTCGGATTAGCCACACCTACTGCTGTGCTGGTTGGAACTTCTTTGGGGGCTACAAGAGGTTTGCTGTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAGATACAGTTGTATTTGACAAAACAGGAACCCTTACAGTTGGTCGACCTGTTGTGACAAAGGTTATTGCTCCTTCATGTGAACAAAATGCAAATTCAAGCCAAGCAGAAGAGAATACATGGTCTGATGTCGAAGTTTTGAGGTTAGCAGCTGCGGTAGAATCGAATTCAGTACATCCAGTTGGGAAAGCTATTGTGGATGCTGCTCAGAAAGTTAATTGTACTAACGCTAAGGTTGCAGATGGAACATTCCTTGAAGAACCTGGTTCTGGTGCAGTAGCAACTGTTGATAACAAAAAGGTCTCTGTTGGGACATTGGATTGGATCACCAGGCATGGGGTTAGCAGCAAGATACATCAAGAATTGGAGGATTTTAAAAATCAATCTGTTGTCTATGTTGGAGTAAATGATACTCTAGCTGGCCTTATTTATTTTGAAGATGAGATAAGGGAAGATGCAAAACACGTTGTTGATCAATTGTCTAAGCAAGGTATTGGAGTATACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAGCATGTTGCATCCCTTGTTGGAATCTCTAAAGAGAAGGTTCTATCTGGAGTGAAACCAGATGGGAAAAAGAAGTTCATAAATGAACTACAGAAAGATCAGAAGATTGTAGCTATGGTTGGTGATGGAATTAATGATGCAGCTGCCCTGGCCTCTTCACATATTGGTATCGCATTAGGTGGAGGTGTTGGAGCTGCTAGTGAGGTGTCTTCTATTGTATTGATGCGCAACCAGCTCTCACAGTTAGTTGATGCTTTGGAGCTCAGCAGGCTAACCATGAATACTGTAAAACAAAATCTTTGGTGGGCCTTCATATACAACATTGTAAGTTCTCCCGTCCAATATAGAAATTGA 2565 0.4561 MMVQRDRHAILVPTTTNNNINSYASRHIPSSPAVFSFSPSLSAFRVLLPPRPPCRLRCVSSSVASFASEAGGGGFGGAGTGGEGGGGGGGGESGDGSVKLVGDAAQEVSALSPDVIILDVSGMTCGGCAATVKRILESRPQVSSASVNLTTETAIVWPVSEAKKAPNWQKHLGEALAEHLTNCGYSSSLRDSGRDNFIQIFERKMEEKRKQLRQSGRELAVSWALCAVCLVGHLSHFFAARAPWIHAFHSVGFHVSLSLFTLLGPGRQLILDGLKSLLKGAPNMNTLVGLGALSSFTVSSFATLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSLLPSKARLLVNNGKTEVDSIVEVPSDSLSVGDQIIVLPGDRIPADGIVRSGRSTVDESSFTGEPLPVTKLPGSDVAAGSINLNGTLTMEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAVSFTTFTFWSLFGKHVLPTALYQGSAVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFAMVDTVVFDKTGTLTVGRPVVTKVIAPSCEQNANSSQAEENTWSDVEVLRLAAAVESNSVHPVGKAIVDAAQKVNCTNAKVADGTFLEEPGSGAVATVDNKKVSVGTLDWITRHGVSSKIHQELEDFKNQSVVYVGVNDTLAGLIYFEDEIREDAKHVVDQLSKQGIGVYMLSGDKRNAAEHVASLVGISKEKVLSGVKPDGKKKFINELQKDQKIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMRNQLSQLVDALELSRLTMNTVKQNLWWAFIYNIVSSPVQYRN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04587 854 SUPERFAMILY Calcium ATPase, transduction domain A 366 453 IPR008250 -
Aip03g04587 854 Pfam Heavy-metal-associated domain 118 185 IPR006121 GO:0046872
Aip03g04587 854 Gene3D - 555 827 IPR023214 -
Aip03g04587 854 Gene3D - 575 708 IPR023299 GO:0000166
Aip03g04587 854 Pfam haloacid dehalogenase-like hydrolase 560 789 - -
Aip03g04587 854 ProSitePatterns E1-E2 ATPases phosphorylation site. 566 572 IPR018303 -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 800 812 - -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 777 796 - -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 564 578 - -
Aip03g04587 854 PRINTS P-type cation-transporting ATPase superfamily signature 403 417 - -
Aip03g04587 854 CDD P-type_ATPase_HM 219 850 - -
Aip03g04587 854 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 322 589 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip03g04587 854 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 603 851 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip03g04587 854 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 266 850 - -
Aip03g04587 854 SUPERFAMILY HAD-like 562 850 IPR036412 -
Aip03g04587 854 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 284 850 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aip03g04587 854 SUPERFAMILY Calcium ATPase, transmembrane domain M 316 846 IPR023298 -
Aip03g04587 854 PANTHER ATP7, ISOFORM B 55 850 - -
Aip03g04587 854 Coils Coil 198 218 - -
Aip03g04587 854 CDD HMA 118 188 IPR006121 GO:0046872
Aip03g04587 854 Pfam E1-E2 ATPase 348 542 - -
Aip03g04587 854 Gene3D - 334 457 - -
Aip03g04587 854 SFLD Haloacid Dehalogenase 547 827 - -
Aip03g04587 854 SFLD p-type atpase 547 827 IPR044492 -
Aip03g04587 854 SUPERFAMILY HMA, heavy metal-associated domain 116 188 IPR036163 GO:0046872
Aip03g04587 854 ProSiteProfiles Heavy-metal-associated domain profile. 115 189 IPR006121 GO:0046872
Aip03g04587 854 MobiDBLite consensus disorder prediction 77 98 - -
Aip03g04587 854 ProSitePatterns Heavy-metal-associated domain. 120 149 IPR017969 GO:0046872
Aip03g04587 854 Gene3D - 115 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04587 Aip-Chr3 130165762 130178230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04587 275 850 Primary Pumps ATPases AT1G63440 38.071 3.94e-111 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04587 K17686 - gmx:100796210 1290.79